| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6998 |
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| Symbol | |
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| ID | 6248513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1650434 |
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| End bp | 1651168 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642598648 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001863050 |
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| Protein GI | 186471732 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAC TGAATGGCAA AACCACGGTG ATTACAGGTG GCGCTACCGG CATCGGCCGC
GCCACAGCAA GGCGCTTCAT CGAGGAAGGC GCCTTCGTCT TCATCTTCGG CCGCCGGCAG
GAAGCGCTCG ACGCCGCTGT GGCCGACCTT GGACCCAACG CCCGCGCGGT GAAGGGCTCC
GTCTCCGAGC TGGCAGACCT CGACCGACTC TACGCGGCGG TGAAGTCGGA GCGCGGAACC
CTCGACATCG TCTTCGCCAA TGCCGGGGCG GGAAGCCAGC TTCCGCTTGG CAAGATCACC
CCCGAGCACA TCGACGACAT CTTCGACACG AATGTGAAGG GGTCGATCTT CACGGTGCAG
AAGGCACTAC CCCTGATGGG CAAAGGCGGT TCGATCATCC TGACGGGATC GAGCGCGGGC
ACTACGGGCG CCCCTGCATT CAGCGCCTAC AGCGCGAGCA AGGCTGCAGT GCGTAACCTC
GCGCGGACCT GGGCGGAGGA CCTGAAGGGC ACCGGCATCC GGGTCAACGT GCTGTCTCCC
GGGCCGACCG CGACCGAACT CGCGAAGGAA GCGCTAGGCG AGGAAGGTAT GAAGGTCTTC
GCTTCCCTCA ATCCGCTCCA GCGCATGGCC GACCCGGCGG AAATCGGGGC GGTGGCCGCC
TTTCTTGCGT CGTCGGACAG CAGCTTCATG ACCGGCAGCG AGGTCGCCGT TGACGGTGGC
CTGGCCCAAC TTTGA
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| Protein sequence | MNRLNGKTTV ITGGATGIGR ATARRFIEEG AFVFIFGRRQ EALDAAVADL GPNARAVKGS
VSELADLDRL YAAVKSERGT LDIVFANAGA GSQLPLGKIT PEHIDDIFDT NVKGSIFTVQ
KALPLMGKGG SIILTGSSAG TTGAPAFSAY SASKAAVRNL ARTWAEDLKG TGIRVNVLSP
GPTATELAKE ALGEEGMKVF ASLNPLQRMA DPAEIGAVAA FLASSDSSFM TGSEVAVDGG
LAQL
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