| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6977 |
|---|
| Symbol | |
|---|
| ID | 6248492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1628192 |
|---|
| End bp | 1629166 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642598627 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001863029 |
|---|
| Protein GI | 186471711 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCG ACCGCATTGA CCTGAACCTG TTGCGCGTGT TCGACGCAAT CTTCGAAGAC
CGCAATCTCG GTCTGGCGGG CAAGCGTCTG CATCTGAGCC AGTCCGCCAT CAGCCATGCG
CTTGCGCGGA TGCGCGAGGT GCTCGGCGAC GATCTGTTCG TGCGCACAGG CAAGGGCATG
GAGCCGACCA TGCGTGCGCT CCGAATGGCG GCGCAGGTAC GCGGCGCGCT TCAGCAGATC
CGCGCCGCGC TGGGCGTCGA TGAGTTCGAT CCACGCGTCG CGCAACGCAA GTTCGTCGTT
GCGGCGAACG ACTACATCAC GTCGCTGCTG CTCGGGCGTC TCAGTCAACG GCTGCATGCG
GAAGCGCCGC TCGTGGATCT CGTGGTGCGG CCCTCGACGC GCCTCGATCT CGCGGGCCAG
ATCGACGTCG GCCGGATCGA CATGGCAATC GGCATTTTCG CGGACGTGCC GACGCGTTTG
CGCGGGACGA CGCTGTGGGA ACAGACCGAC GTCGTGCTGC TTCATCGCGA TCATCCCATC
GCCGGGCGCG CTGTTACGCG CGACGACATG CTGGCCCATC CGCTCATCGC GATCTCGCAG
GGCGGCGAGG AGGAGGGCGC CGTGGGCGGC TTTATCGTCG AAAGAGGGCT CGCACGGCAA
TCGGAGATGT TCAATCGCGA TGCGCTCAAC CGTGCGTTCG ACGATCCCGC GGAGACGCCA
CGCATGCGTA TGTCCGTCGC GCACTCGCTC GCGCTTCCCG CGCTGCTTCG TCACAGCGAC
ATGCTTGCGC TGGTGCCGTC GTCGCTTGGC CGCGAACTGC AGCGCTATGG CGAACTGAAA
ATGTGTGCGA CACCCTATGC GTGTCCCGAC GTCGCCGTGC GAGCCGTATG GCATGAACGC
AACGACGCCG ACCCCGCTCT GCAATGGCTG CGGCAACAAC TCGCCGATGT CGCACGCCAG
GTCCGAGGCT GCTGA
|
|---|
| Protein sequence | MSADRIDLNL LRVFDAIFED RNLGLAGKRL HLSQSAISHA LARMREVLGD DLFVRTGKGM
EPTMRALRMA AQVRGALQQI RAALGVDEFD PRVAQRKFVV AANDYITSLL LGRLSQRLHA
EAPLVDLVVR PSTRLDLAGQ IDVGRIDMAI GIFADVPTRL RGTTLWEQTD VVLLHRDHPI
AGRAVTRDDM LAHPLIAISQ GGEEEGAVGG FIVERGLARQ SEMFNRDALN RAFDDPAETP
RMRMSVAHSL ALPALLRHSD MLALVPSSLG RELQRYGELK MCATPYACPD VAVRAVWHER
NDADPALQWL RQQLADVARQ VRGC
|
|---|
| |