Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6560 |
Symbol | |
ID | 6248097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1145444 |
End bp | 1147606 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642598232 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001862634 |
Protein GI | 186471316 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.441976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.646619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTCG ACAGGTTCGA CGCATGGTGG AGCGGGTTCC GTTATGTGCG GCGCAGTGTG ATGCTGCGGC TGCTCGGGAC GGTGCTCGCG TTCAGTTGCG CGATCACGTT GATTTTGACC GCGGTGCAGC TGTACCGCGA CTACGAACGC GGGTTCGAGC AGATCCAGAA TCGGCTCGTG GATATCGACC GCAGCTATCG TGACAGTCTG GGCGAAGCGC TGTGGCGTCT CGACCAGCCG CAACTGAAGC TCGAACTCGA CGGGATGCTG CGGCTCGCGG ATATCCGCGC CGCCGAAGTG CGCGAGATGC CTTCCTTCAG TTCCTCGATG GTGGTGAGCG TGGGCCAGCG CGAGCACAGG TCGGGGATGA CGGTCGCGCG TGAGTTCCCG CTCGTGTACC ACGTGCAAGA CAGGGTAGAG CAGATCGGCA CGCTGTATGT CGAAGCGACG CTCGCCAACC TGTATCACGA TCTCGCTCGC ACCGCGCTCG TGATCCTCGT GAGCCAGGGC GCGAATACGT TTCTGGTCGC GCTGTTCACG TTCTACATTC TGTCGCGGCT GGTCACGCGG CATCTCACGG CAATTGCACA CAGCGTGAGC GACTATGACT TTCACGAACC GCCGTCTGCG TTCGTGCTTC AGCGCAAAGC GCCGCGCGAG CCGGACGAAC TCGATCGCGT GGTGTCGGCC TTCAACGCGA TGGGGATGCG GCTGCATCGC GCGTATCTTG ACGAACGCGA AGCGGCCGTC GAGCGCGAAG CGCGGCGTAT GGCGGAAGCA GCCAACCGCG CGAAAGGCGA GTTCCTCGCG AACCTGAGCC ATGAACTGCG CACGCCGCTC AACGGCATTC TGGGCTACGC GCAGATTCTG GGACGCGACG ACTCGCTGAG CCTGCGTCAG CGCGACGGCG TCGCCGTGAT TCAGCAAAGC GGCGAGCATC TGTTGACGCT GATCGACGAG ACACTCGATT TCGCGAAGGT CGAAGCGGGC AAGCTGCGCA TCGAGATTTG CGACGTGCCG CTTGCCGGCC TGGTCGATAC GATTCGGGAG ATCATCGGCG TGAAGGCCGA GCAGCGGCGG CTCGCGTTCG CATGCAGTGT CGCTGCGGAC GCGCCGTGCG GCGTGCGTGC GGACGAACAT CGCTTGCGGC AGGTGCTGCT CAATCTGCTG TCGAACGCCG TGAAATTTAC GGACCGCGGC GAGGTGCGTC TCTTCATCAG GCGCGGCGAA AGCGGCGCGG TCCGTTTCGA GGTGCACGAC ACGGGCATCG GCATTTGCGC CGAGTATCAC GAGACTATCT TCATGCCTTT CGAGCAGGCA GGCGGCGCGG AACGCCGCGC GGGCGGCACG GGGCTGGGAC TGGCGATCAG CCGCCAGTTC GTCCGTGCGA TGGGCGGCGA GGTGAACGTC GACAGCGTCG TCGGGCGCGG CAGCGTGTTC TGGTTCGAAC TGCCGCCCGC ACTCGTCGAA CCGTGCATCG CGCATGCAGC GAGCGCCGCG GCGATCGTCA CGGGTTACGC AGGCCCGCGC CGCAAGGTGC TCGTGATCGA CGACGTGCAG GTCAACCGGA CCGTCGTCGT CGAACTGCTG ACGCGGATCG GCTTCGCCGC CACGCAAGCG GCGAGCGGCG CCGACGGCAT CGCGCTCGCG CTGGCGCAAC GTCCCGATCT GATCCTCACG GACATCGTGA TGCCCGGCAT AGGCGGCCTC GACGTGACGC GCCGTTTGCG TGCGATGCCC GAGTTCGCGA GCACGCCGAT CATCGCCATC TCGGCGTCGC CGTTCGGCAC CGACGGCGCA AGCAGCGTCG AAGCGGGGGC GAACGCGTTC ATTGCGAAGC CCGTCGATTT CGACGTCCTG CTTGCGCGCA TCGGTGAGTT GCTGGGAATC GAATGGATCC GCGCCGCCGT GCAGGAGCAT GCCGGGGCGC ACGTACAAGG CGCCTCCCCG GCGGGCGTGC CCGCCGACGC GATGAGCGAA CTGCACCGGC TCGCGCGCGA CGGCAACATG AGCGGCATCG CACAATGGGC GGAGCGCATC GCGACCAGCG ACCCGCCGCT CGCCGCTTTC GCCGCGCGGC TGCATCAACT GGCGCGCGCG TATCAGTCGA AGGCGATCCT GCAACTGGTG GAGCGGTATC TCGAAGGGAA CACGGCGTCA TGA
|
Protein sequence | MALDRFDAWW SGFRYVRRSV MLRLLGTVLA FSCAITLILT AVQLYRDYER GFEQIQNRLV DIDRSYRDSL GEALWRLDQP QLKLELDGML RLADIRAAEV REMPSFSSSM VVSVGQREHR SGMTVAREFP LVYHVQDRVE QIGTLYVEAT LANLYHDLAR TALVILVSQG ANTFLVALFT FYILSRLVTR HLTAIAHSVS DYDFHEPPSA FVLQRKAPRE PDELDRVVSA FNAMGMRLHR AYLDEREAAV EREARRMAEA ANRAKGEFLA NLSHELRTPL NGILGYAQIL GRDDSLSLRQ RDGVAVIQQS GEHLLTLIDE TLDFAKVEAG KLRIEICDVP LAGLVDTIRE IIGVKAEQRR LAFACSVAAD APCGVRADEH RLRQVLLNLL SNAVKFTDRG EVRLFIRRGE SGAVRFEVHD TGIGICAEYH ETIFMPFEQA GGAERRAGGT GLGLAISRQF VRAMGGEVNV DSVVGRGSVF WFELPPALVE PCIAHAASAA AIVTGYAGPR RKVLVIDDVQ VNRTVVVELL TRIGFAATQA ASGADGIALA LAQRPDLILT DIVMPGIGGL DVTRRLRAMP EFASTPIIAI SASPFGTDGA SSVEAGANAF IAKPVDFDVL LARIGELLGI EWIRAAVQEH AGAHVQGASP AGVPADAMSE LHRLARDGNM SGIAQWAERI ATSDPPLAAF AARLHQLARA YQSKAILQLV ERYLEGNTAS
|
| |