| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6512 |
|---|
| Symbol | |
|---|
| ID | 6248051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1092703 |
|---|
| End bp | 1093920 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642598186 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_001862588 |
|---|
| Protein GI | 186471270 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.397453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0847554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TCTCGACGCC GTCGCAGGAG CACGCGCAGC CGGCATCGCG CAGCAGCGTC
GGGCCGCCGC TGTGGCTGCT CGCCGAACTG ACTTACCGCT GCCCGCTGCA TTGCGCGTTC
TGCTACAACC CGGTCAACTA CACCGATCAT CGCGACGAAC TCAGCACCGC GCAATGGATC
GACGTGTTGC AGCAGGCGCG CAAGCTCGGC GCAGCGCAGC TCGGCTTTTC CGGCGGCGAA
CCGCTGATGC GCGACGATCT CGAAGCGCTT GTCGCCGAGG CGCACCGGCT CGGCTTCTAT
ACGAACCTCA TTACGTCGGG TGTCGGTCTG ACGGAGGCGC GCCTCGGCAC GCTCAAGGCC
AACGGGCTCG ATCACATTCA ACTGTCGTTT CAGGACTCGA CGCAGGAACT CAACGACTTT
CTCAGCAGCA CGCGCACCTT CGACCTGAAG AACCGCGTCG CGCGTTCGAT CAAGGCGCAT
GGCTTTCCGA TGGTGCTGAA CTGCGTGCTG CATCGCTACA ACCTGCCGCA TGTCGACAAG
ATCATCGACA TGGCGCTGGC GATGGGCGCC GAGTATCTGG AACTCGCGAA CACGCAATAC
TACGGCTGGG CGCACACGAA CCGCGCGCAA CTGATGCCGA CGGCCGAACA GCTACGCGAA
GCGGAAGCCG TAGTCGAACG TTATCGCAAG GAGATCGGCA ATCGCTGCAA GATCTTCTTC
GTCGTGCCCG ACTACTTCGA AACGCGGCCC AAGCGCTGTA TGAACGGCTG GGGCTCGGTG
TTCCTCGGCA TCGCGCCCGA TGGTGCCGCG CTGCCCTGTC ATTCGGCACG CTCGCTGCCG
GGCCTCACGT TTCCGAACGT GAAGGACACA TCGCTCGAAC ACATATGGTT CGACAGCGAC
GCGTTCAACC GCTTTCGCGG CTTCGAATGG ATGAAGGAAC CGTGCAGAAG CTGCGACGAG
AAGTCCAAAG ACCTCGGCGG CTGCCGTTGT CAGGCGTATC TGCTGACACA GGATGCGGCC
AATGCCGACC CTGTCTGCGA CAAGTCCGCG CATCATGAGC AGGTCGTGCG CGTCGTGCGC
GACGCAGCAA GACGGTCGGA AACGCTTGCG CCCGACGAGC AGCCCGTCAC ATTCCGCAAC
GACGCGAACT CGCGACGCCT CACCGCAAGC ACGCGAGAAA CCGCTGCAGC GTCCCGCGAT
GAGGGAACGC AACCATGA
|
|---|
| Protein sequence | MTDLSTPSQE HAQPASRSSV GPPLWLLAEL TYRCPLHCAF CYNPVNYTDH RDELSTAQWI
DVLQQARKLG AAQLGFSGGE PLMRDDLEAL VAEAHRLGFY TNLITSGVGL TEARLGTLKA
NGLDHIQLSF QDSTQELNDF LSSTRTFDLK NRVARSIKAH GFPMVLNCVL HRYNLPHVDK
IIDMALAMGA EYLELANTQY YGWAHTNRAQ LMPTAEQLRE AEAVVERYRK EIGNRCKIFF
VVPDYFETRP KRCMNGWGSV FLGIAPDGAA LPCHSARSLP GLTFPNVKDT SLEHIWFDSD
AFNRFRGFEW MKEPCRSCDE KSKDLGGCRC QAYLLTQDAA NADPVCDKSA HHEQVVRVVR
DAARRSETLA PDEQPVTFRN DANSRRLTAS TRETAAASRD EGTQP
|
|---|
| |