| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6410 |
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| Symbol | |
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| ID | 6247949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 987117 |
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| End bp | 987950 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598084 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001862486 |
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| Protein GI | 186471168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.639273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTG GAAAAACCAC TCTCATCGCG CACATCGGTT TTCCGACCGA GAGCTTCAAG
TCGCCGATGA TCTACAACCC GTGGTTCGAG CAGAAGGGTA TCGATGCCGT CGTCGTGCCG
ATGGGCGTCA AGGCGGAAGA CTACGAGCAG AGCTTCAAGT CGATCTTCCG CTTCACCAAT
CTGCGTGGGG CGCTCATCAC GATGCCGCAC AAGGTGACGA CGGTCGGGCT GGTCGATGAA
GTCACGCCCG CCGTGCGCAT CGCGGGTGCC TGCAACGCGG TGCTCAGGCG AGCCGACGGT
ACGCTTTTGG GCGATCAGTT CGACGGCGCC GGTTTCGTGC GCGGCGTGCT TCGCAAGGGG
CGGCAACTGA AAGGCGCGCG CGTGCTGGTG TCGGGTTCGG GTGGTGTGGG TTCGGCGATC
GCGGCATCGC TGGCGGCGGC CGAAGTTGGA GAACTGGCGC TGTTCGACAC GCGTGCGGAT
TCCGCCGAAG GGCTCGCGCA GCGGCTGCGC GACAACTATC CGGCACTGAC GGTGCGCACG
GGCTCGAACG ATCCGCACGG CTACGACGTC GTGGTGAATG CAACGCCGCT CGGCATGAAA
GACGGCGATC CGCTGCCGTT CGACGTCGCG CGAATTTCGC CGGAATGCTT CGTCGGCGAG
GTCGTGATGA AGTCGGAGTA CACGCCATTC CTGCGCGCCG CGCGCGAAAA GGGCTGCGAA
GTGCAGGTCG GCACCGACAT GCTGTTCGAA ATGATTCCCG CGTACCTGGA GTTCTTCGGC
TTCGGCACTG CGACGCCGGA AGAACTGCGC AGCGCTTCGA CGATCGCATA CTGA
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| Protein sequence | MISGKTTLIA HIGFPTESFK SPMIYNPWFE QKGIDAVVVP MGVKAEDYEQ SFKSIFRFTN
LRGALITMPH KVTTVGLVDE VTPAVRIAGA CNAVLRRADG TLLGDQFDGA GFVRGVLRKG
RQLKGARVLV SGSGGVGSAI AASLAAAEVG ELALFDTRAD SAEGLAQRLR DNYPALTVRT
GSNDPHGYDV VVNATPLGMK DGDPLPFDVA RISPECFVGE VVMKSEYTPF LRAAREKGCE
VQVGTDMLFE MIPAYLEFFG FGTATPEELR SASTIAY
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