Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6328 |
Symbol | |
ID | 6247868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 902077 |
End bp | 903324 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642598003 |
Product | extracellular solute-binding protein |
Protein accession | YP_001862405 |
Protein GI | 186471087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.634634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAT TACTGATGCC GGTTGCGGCG GCTGTCGCGC TGCTTGTCGC AGGTACACAT GCTGTTCGCG CTGCAGAACA GATTTCCGTA CTTCACTGGT GGACCTCCGG TGGCGAGTCG AAGGCCATCC GGGTGCTCAA GGACGACATG AGCAAACAGG GCTACGAGTG GAAAGACTTC GCTATCGCGG GCGGCGCCGG CGCGGCGGCC ATGACGGCAT TGAAGACGCA GGTGATCTCG GGCAATGCAC CGTCGGCCGC TCAGATCAAG GGGCCGCTGA TTCAGGACTG GGCCGAGCAA GGGACGCTGG TCACGGTCGA TCCGGCCGCG GCCGACTGGA AAGCGCACAC GCCCACGCAA ATCGATAGTG ATGTGAAGGC GGGCGGTCAC TACGTGGCGG CGCCGTTCTC CGTCCACAGA ATCAACTGGC TGTGGATCAA CAAGGCGGAC CTCGATAAGG TCGGCGGCAC GCCGCCGACG ACATGGCCGG AGTTCTTCGC GCTCGCCGAC AAGTTTCGCG CCGCGGGCAT CACGCCTGTC GCGCATGGTG GGCAACCGTG GCAAGACATG ACGATCTGGG AGACGGTCGT GCTGTCTCAG GGTGCGGACT TCTACCGCAA AGCGCTGGTC GATCTCGATC AGAAGACGCT GACGTCGCCG CAGATGGTGC AGGTGTTCGA GACCGTCCAG AAGATTCGCA CTTACTTTGA CAAGGGCTAC CACGGCCGCG ACTGGAATCT TGCGACCGCG ATGGTGATTT CCGGCTCGGG CGGCATGCAG TTCATGGGCG ACTGGGCCAA GGGCGAATTC GCCAACGCGA ACAAGAAGGC AGATGTCGAC TATATCTGCG CGGCCGCGCC CGGTACGTCG AACGCCTATA CGTATACGGC CGATGCATTC GTTTTCTTTC AGCAGAACGG CAAGAAGGAC GCGACGCCGG GGCAGATTGC GCTCGCCAGG ACGATCATGT CGGTCGATTT CCAGCAGCAG TTCAGTCTCT ACAAGGGTTC CATTCCAGCG AGGCTGGATG TGCCGATGGA CAAGTTCGAC AGCTGCGCCA AAAAATCGCG TGCAGACGAG CAGGCGACGA TCAAGACGGG CGGATTCCTG CCTTCGCTGG CCTTCGGCGA ACTTCAGTCG CCCGTCACCG CTGGTGCGAT CACCGACGTC GTGACGAATT TCATGAACTC CAGTGAGGAT GCGAAAGAAG GCGTGCGCAA GCTCGCGGCC GCTGCGAAGG TCAAGTGA
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Protein sequence | MKQLLMPVAA AVALLVAGTH AVRAAEQISV LHWWTSGGES KAIRVLKDDM SKQGYEWKDF AIAGGAGAAA MTALKTQVIS GNAPSAAQIK GPLIQDWAEQ GTLVTVDPAA ADWKAHTPTQ IDSDVKAGGH YVAAPFSVHR INWLWINKAD LDKVGGTPPT TWPEFFALAD KFRAAGITPV AHGGQPWQDM TIWETVVLSQ GADFYRKALV DLDQKTLTSP QMVQVFETVQ KIRTYFDKGY HGRDWNLATA MVISGSGGMQ FMGDWAKGEF ANANKKADVD YICAAAPGTS NAYTYTADAF VFFQQNGKKD ATPGQIALAR TIMSVDFQQQ FSLYKGSIPA RLDVPMDKFD SCAKKSRADE QATIKTGGFL PSLAFGELQS PVTAGAITDV VTNFMNSSED AKEGVRKLAA AAKVK
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