Gene Bphy_6328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6328 
Symbol 
ID6247868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp902077 
End bp903324 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content61% 
IMG OID642598003 
Productextracellular solute-binding protein 
Protein accessionYP_001862405 
Protein GI186471087 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.634634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TACTGATGCC GGTTGCGGCG GCTGTCGCGC TGCTTGTCGC AGGTACACAT 
GCTGTTCGCG CTGCAGAACA GATTTCCGTA CTTCACTGGT GGACCTCCGG TGGCGAGTCG
AAGGCCATCC GGGTGCTCAA GGACGACATG AGCAAACAGG GCTACGAGTG GAAAGACTTC
GCTATCGCGG GCGGCGCCGG CGCGGCGGCC ATGACGGCAT TGAAGACGCA GGTGATCTCG
GGCAATGCAC CGTCGGCCGC TCAGATCAAG GGGCCGCTGA TTCAGGACTG GGCCGAGCAA
GGGACGCTGG TCACGGTCGA TCCGGCCGCG GCCGACTGGA AAGCGCACAC GCCCACGCAA
ATCGATAGTG ATGTGAAGGC GGGCGGTCAC TACGTGGCGG CGCCGTTCTC CGTCCACAGA
ATCAACTGGC TGTGGATCAA CAAGGCGGAC CTCGATAAGG TCGGCGGCAC GCCGCCGACG
ACATGGCCGG AGTTCTTCGC GCTCGCCGAC AAGTTTCGCG CCGCGGGCAT CACGCCTGTC
GCGCATGGTG GGCAACCGTG GCAAGACATG ACGATCTGGG AGACGGTCGT GCTGTCTCAG
GGTGCGGACT TCTACCGCAA AGCGCTGGTC GATCTCGATC AGAAGACGCT GACGTCGCCG
CAGATGGTGC AGGTGTTCGA GACCGTCCAG AAGATTCGCA CTTACTTTGA CAAGGGCTAC
CACGGCCGCG ACTGGAATCT TGCGACCGCG ATGGTGATTT CCGGCTCGGG CGGCATGCAG
TTCATGGGCG ACTGGGCCAA GGGCGAATTC GCCAACGCGA ACAAGAAGGC AGATGTCGAC
TATATCTGCG CGGCCGCGCC CGGTACGTCG AACGCCTATA CGTATACGGC CGATGCATTC
GTTTTCTTTC AGCAGAACGG CAAGAAGGAC GCGACGCCGG GGCAGATTGC GCTCGCCAGG
ACGATCATGT CGGTCGATTT CCAGCAGCAG TTCAGTCTCT ACAAGGGTTC CATTCCAGCG
AGGCTGGATG TGCCGATGGA CAAGTTCGAC AGCTGCGCCA AAAAATCGCG TGCAGACGAG
CAGGCGACGA TCAAGACGGG CGGATTCCTG CCTTCGCTGG CCTTCGGCGA ACTTCAGTCG
CCCGTCACCG CTGGTGCGAT CACCGACGTC GTGACGAATT TCATGAACTC CAGTGAGGAT
GCGAAAGAAG GCGTGCGCAA GCTCGCGGCC GCTGCGAAGG TCAAGTGA
 
Protein sequence
MKQLLMPVAA AVALLVAGTH AVRAAEQISV LHWWTSGGES KAIRVLKDDM SKQGYEWKDF 
AIAGGAGAAA MTALKTQVIS GNAPSAAQIK GPLIQDWAEQ GTLVTVDPAA ADWKAHTPTQ
IDSDVKAGGH YVAAPFSVHR INWLWINKAD LDKVGGTPPT TWPEFFALAD KFRAAGITPV
AHGGQPWQDM TIWETVVLSQ GADFYRKALV DLDQKTLTSP QMVQVFETVQ KIRTYFDKGY
HGRDWNLATA MVISGSGGMQ FMGDWAKGEF ANANKKADVD YICAAAPGTS NAYTYTADAF
VFFQQNGKKD ATPGQIALAR TIMSVDFQQQ FSLYKGSIPA RLDVPMDKFD SCAKKSRADE
QATIKTGGFL PSLAFGELQS PVTAGAITDV VTNFMNSSED AKEGVRKLAA AAKVK