| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6262 |
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| Symbol | |
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| ID | 6247811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 827398 |
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| End bp | 830169 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642597946 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001862348 |
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| Protein GI | 186471030 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.651694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.376335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTT TCATTGATTT TGAGGACGAC GGTGGCGGAA AAATAGATGG TACGGCATTC
GAACTTTTAA TCGTCGGAGC CGGCGCAGCC GGACTTACGA TTGCTCGCGA GCTTTCAGGA
CTCGGTCTGC GTTTGCTGAT CGTGGAAAGC GGCGGTTTGG AAGAAACGCC CAATCATGAA
GCACTCAATG CGGTGGACGT CCCAGATGAC ATCGGCCGAG ATGAGTTAAA CCGTGACCGC
GATGCGTCGC ACGCTTATCA GATGAGGTTG TGGCGCGCTG ATAATCAGCG GTATGGTGTT
CGGTGCCGTG TATTTGGTGG TTCAACGGTA GCGTGGGCTG GCAAGGTTGC TCCGTTCGAC
GCTGCCGACT TCGCCCACCG TGAGTGGGTG CCTCATTCGG GGTGGCCGTT GCGTTTCGAC
GCGCTGGCTC CCTATATCAC GTTGGCAGCA AAGCGCCTTG ACGTCGGCCC ACTGCTCACT
GATCACCGTT TTTGGACGAC CGACAAGGCG AGGATGCCAC ACGAGATCGG AAGGCTAACG
TCGTTTTCCT CATATTTCTG GCAAATAGCG CGCTCGCCTG ACGACATGAC TGATGTCTTA
CGCTTTGGGG CCGAATTCCG CAGAGAGAAC CATAAACATG TGACGGTTGT ACTTAATGCA
ACAACAAGTT CGATAAAAAT TGAAGATGGC AAGGTCATCG GCGTCGAGAT TATTTCTTCG
CTTTCGGGTA GGAAGCGTTG CTTCCTCAGG GCCGGTTTTG TTGTGCTGGC CGCTGGTGCT
GTCGAAAATG CCCGCTTACT TCTTGTCTCA AAAGATAATT CCGGCGTCGC AATAGGTAAC
ACGAACGATG TGGTTGGTCG GTACCTGATG GATCATCCAT GCATGTCGTT AGGGCGGTTT
ACCGCGCCAT CACAAGGGCG GGCAGCAGCG ATGTTTGGCT TTTTTACGCG GTTCGCTGAA
CACCGTGCTT TTATGTATTC CCACGGATTG TCGCTAAACG CAAAGGTTCA GAAGCAGCAA
CATTTGACGA ATATGGCGGT CTATGCAAAT GTGCGCATTT CCCACGACGA TCCCATTCAG
GCGCTAAAGA GACTAGCCAA AAGGCAGAGC GAGCAACGCA CTGCAGACTT TTTAGCCGTG
ACCGCAAGTC CCGCCCTGGT CGTGGGTCAA GTTGGCCGGA TGTTGTTAGG TAACCAGAAA
TTGCCACGGC GACTGCGTCG CAGTCTCGCC GATCTGGCCG TCTTACTTAA CGCGAACTTC
GTAGCCCGCG ATTACATGGC CAAAGGCTCG GCGCGAAAGA TCGATCAGGT CACCCTGGAC
GTTATCTGCG AGCAGCCGCC ATCGCCACAA AATCGTGTCA CGCTTTCCGA GCAATGCGAC
CGCCTTGGCA TTCCGATACC ACGCGTCATC TGGGACGCGA GCGACCAGGT GCGGCATGGA
GTATTGAAGC TGGGGGCATT GTTGGCAGAA GAACTCGAGC GCGCCGGAAT TGACGGATTC
CAGTTGTCGC CCGCGTTGGC TTCTGGCGAC GCTTCGAAGA TCGTCCTTCA CGACATGGGT
CACTCTGCGG GGACAACGCG GATGGGGCTA GATGTGGCAT CAAGCGTGGT AGACACAAAT
TGCCAGGTTC ATGGAGTAAA AGGGCTGTAT GTGGCTGGAG CCTCCGTTTT CCCAACCAGT
GGGCATGCCA ATCCGACGAT GGTCATCATG GCGCTTGCAA TACGACTCGC AGATCATTTG
AGAGAGCGCC TTGCAGCTCA GCGGCTTCAC GAGCTCGAAA AAACCACCTG GATTAGTGAC
AACAGTCCCC TCGTGCTCGT CACGGGTGCG ACCGGCAATC TCGGGACGGC AGTAGTTGAG
CAGCTGCTCG CAAAAGGATA TCGCGTAAGG GGGCAGTTTC ACCGGAACCT ACCCAATGAG
GCCCGGGTTG AATGGCTGTG TGCAGACTTT TCAAAAGATG ATTTCGCAGA TGAGGAACTG
GACAGACTTG TTACCGGAGT CACCGCAGTC ATTCATTTGG CGGCGAGTTT GCCGGGCATG
CCGGCCACGC ATACCACTAA CGTTGTCAAT CTCGAACGCC TTGCGCGAGC CTGTGTGCGA
AACGGCGTCA AATATTTCGG TCAGGCCAGC TCAATGGTGG TTTACGGCTC GCCTTCGAAA
CGGCTCGTAA CTGAGAGCGA TCCGTTGATC AACCCGGACT TGCCGCTCGA AAAACAATAT
TTCGAATCCG GCTTCATGCG CGAATACGCG CAGAGCAAGC GGCAAGGAGA AGATATACTT
TCGCGGTATG CTCAGAAGAT GAAAGTCGAC CTTTATAGGA TTGCGCTCGC GCAAGGCCCC
GGCTATCTTG AGCAGTCGCT CGCATGGGGG CGCGCGAAAC GTTTCTTGGC GCTGTATCGT
AACAGCCATT ACATCTCTAC ACGTAACGTT GCCAGGGCTG TCGCCCATTT ATTGCAAGTT
TCACTAAACG GCCGTATAAC GACCGGGCTC GATGCGTTCA ATATTGCGGA CATAAACTCA
CCGACCTACA AGCAATTCTA TCGACGAGCC GGCAAGAAAA ATCTTTTCCA TGTTCCGCTT
GTTTTTGATC TTCTAAAAAA CATTGCGATA GGAAGGTGCA TTCCACGACG GTTTCCAATG
GGGTTTTTCC GTCTCGACAA CAGCAAGCTC CGCTCGACTG GATTCGAGCT CGAAAGCGAT
TGGGATAGTT ACTCATCCAA CAATGCCCCG GCGGCCCCAC CTAGGCACCA TGTGGGGCGC
GCCGAGTCGT AG
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| Protein sequence | MTRFIDFEDD GGGKIDGTAF ELLIVGAGAA GLTIARELSG LGLRLLIVES GGLEETPNHE
ALNAVDVPDD IGRDELNRDR DASHAYQMRL WRADNQRYGV RCRVFGGSTV AWAGKVAPFD
AADFAHREWV PHSGWPLRFD ALAPYITLAA KRLDVGPLLT DHRFWTTDKA RMPHEIGRLT
SFSSYFWQIA RSPDDMTDVL RFGAEFRREN HKHVTVVLNA TTSSIKIEDG KVIGVEIISS
LSGRKRCFLR AGFVVLAAGA VENARLLLVS KDNSGVAIGN TNDVVGRYLM DHPCMSLGRF
TAPSQGRAAA MFGFFTRFAE HRAFMYSHGL SLNAKVQKQQ HLTNMAVYAN VRISHDDPIQ
ALKRLAKRQS EQRTADFLAV TASPALVVGQ VGRMLLGNQK LPRRLRRSLA DLAVLLNANF
VARDYMAKGS ARKIDQVTLD VICEQPPSPQ NRVTLSEQCD RLGIPIPRVI WDASDQVRHG
VLKLGALLAE ELERAGIDGF QLSPALASGD ASKIVLHDMG HSAGTTRMGL DVASSVVDTN
CQVHGVKGLY VAGASVFPTS GHANPTMVIM ALAIRLADHL RERLAAQRLH ELEKTTWISD
NSPLVLVTGA TGNLGTAVVE QLLAKGYRVR GQFHRNLPNE ARVEWLCADF SKDDFADEEL
DRLVTGVTAV IHLAASLPGM PATHTTNVVN LERLARACVR NGVKYFGQAS SMVVYGSPSK
RLVTESDPLI NPDLPLEKQY FESGFMREYA QSKRQGEDIL SRYAQKMKVD LYRIALAQGP
GYLEQSLAWG RAKRFLALYR NSHYISTRNV ARAVAHLLQV SLNGRITTGL DAFNIADINS
PTYKQFYRRA GKKNLFHVPL VFDLLKNIAI GRCIPRRFPM GFFRLDNSKL RSTGFELESD
WDSYSSNNAP AAPPRHHVGR AES
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