| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6258 |
|---|
| Symbol | |
|---|
| ID | 6247807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 822309 |
|---|
| End bp | 822839 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642597942 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001862344 |
|---|
| Protein GI | 186471026 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3652] Predicted outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.425262 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA TCGCAGTTGT CGTGACAAGC GCACTCGCGC TGGCCGTCTT ACCCGCTGCC
GTGAAGGCCG CCGCTCCCAG CGATGCACAG ATCGCTGCAA TCGTCGTCAC CGCCAATCAG
GTCGATATCG ACGCGGGCAA GCTGGCCGAA TCGAAAACCG GCTCGAAGGA GGTCAAGGGG
TTTGCGCAGC AGATGGTCGC CGACCATGGC AACGTCAACA AGGCGGCAGG CGATCTCGCG
CACAAGCTCA ACCTGACGCC GAAAGCGAAT GAAACCAGCG ATAGCCTCAA ACAAGGCGGC
GACCAGAATC TCGCGAACCT GAAGAGGCTG GAGGGCGCGC AATTCGACCG CGCGTACATC
GATCACGAAG TGGCCTATCA CGAAACCGTG CTCGACGCGC TCGACAAGAC GCTGATTCCG
TCTGCGCAAA ACGCTGAACT CAAAGCGCTG CTGGCGAAGG TGCGGCCCGC GTTCGTCGCC
CACCTCGACC ATGCGAAGAT GCTGCAAAGC TCGCTCTCAA AGTCGCAATG A
|
|---|
| Protein sequence | MKQIAVVVTS ALALAVLPAA VKAAAPSDAQ IAAIVVTANQ VDIDAGKLAE SKTGSKEVKG
FAQQMVADHG NVNKAAGDLA HKLNLTPKAN ETSDSLKQGG DQNLANLKRL EGAQFDRAYI
DHEVAYHETV LDALDKTLIP SAQNAELKAL LAKVRPAFVA HLDHAKMLQS SLSKSQ
|
|---|
| |