Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6121 |
Symbol | |
ID | 6247686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 674034 |
End bp | 675119 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642597822 |
Product | ImpA domain-containing protein |
Protein accession | YP_001862224 |
Protein GI | 186470906 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.537436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.338806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA ACCGAAAGAA AAGTCAGGAC AAGCCTGAGA ACCGCGGCAC GACACACGAC TGGATGGCGC TGATTTCGAC CGAATCGCCT TGTGGTAGCG ATCTCGAATA CGACCCGGAA TTCGTCGTGC TGAGTGCAAG CGTTGCCGCA AAAGCGACGG CTCAGTATGG CGATTTCGTC GGCACGCCGG AGCCGGTGAA CTGGAGCGAC GTGGACCGCG ACTGCCGGCG CCTGATGGTG CGCAGCAAGG ACGTGCGCCT GGCGGTGCTT TTTATCCGGT GTCGCACGCG GCTCGCGGCC GCCACCGGCT TCGCGGAGGG TCTTGGCCTG CTGGCCGGCT GGTTGATGAC CTTCCCTGAT CTGGTTCACC CCCAACTGGG CGTGGACGAA GATCGCTCGG CCGCGCTCGA GATACGCATG AACGCGCTGC AGTCGCTGAC GGACACCGAT GGGCTGATCT CCGATTTGAG GGAAATCGCG CTGACCCGGT CGACGGCAAC GCGTCTACAA CTGCGGGATG TCGAGCGGGC GTTCGCGCAC CCGCGGCCGA GTGACGCGCT GACGCCGGAT TCCGTAACCC GGCAGCTCGA AGAACTGCGC ATGCAGCGTC CTTCGGTTCT CTCCGGATTT GATGATGCGC TTGAAAGTCT GACTGCAATC GAAGGCTGGT GTCGCGAGCA CCTGAGCGTG TACGCGCCGG ACCTCACCGC GCTCAAGCGA CTCCTTCGTC ACGTGGCCAT TCCACCAGGC AGCCGCCAGA CGGACGACGT CCCCGAGGAG GCGAGTGACG CCCAACCAGA TAGCGAGGAG AGCGCAGCAT TGGCCGAGTT ACCGACCGCC CCTGATGAAA GCGAGGCAAG CACGTTGTCC GAACCTTCGA CACCCCGTAC GACCGGCAAG GCGTATGATC GCCACGCTGC GCTCAACCTG ATCCGTGAAG CCCGTCAGTG GTTCGAGCAG CATGAGCCAA GCAGCCCGAT TCCGGTATTG CTCAAGCGCG CTGAGCAGTT TGTTGGCAAG CGATACGTCG ACGTGGTCAA GGCAATTCCC GCCGAGCTCC TGGCCCAATG GGAGCAGGAG GAATAA
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Protein sequence | MSNNRKKSQD KPENRGTTHD WMALISTESP CGSDLEYDPE FVVLSASVAA KATAQYGDFV GTPEPVNWSD VDRDCRRLMV RSKDVRLAVL FIRCRTRLAA ATGFAEGLGL LAGWLMTFPD LVHPQLGVDE DRSAALEIRM NALQSLTDTD GLISDLREIA LTRSTATRLQ LRDVERAFAH PRPSDALTPD SVTRQLEELR MQRPSVLSGF DDALESLTAI EGWCREHLSV YAPDLTALKR LLRHVAIPPG SRQTDDVPEE ASDAQPDSEE SAALAELPTA PDESEASTLS EPSTPRTTGK AYDRHAALNL IREARQWFEQ HEPSSPIPVL LKRAEQFVGK RYVDVVKAIP AELLAQWEQE E
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