Gene Bphy_6084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6084 
Symbol 
ID6247651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp627692 
End bp628396 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID642597787 
ProductXRE family transcriptional regulator 
Protein accessionYP_001862189 
Protein GI186470871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.207069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACCA GAAAAACCTC CACGTCCAGC AACGGCGCTG CCCGCAGGCC GTCCTCACTT 
GCGCCGCGGC GGGCCGCCCA AGCGCCCCGC GCGGCGGCCT CTCACTCCGC ACCGGGCGCG
GCAGCCGAAG GTCTCGGCAC ACGGCTGCGG CACGCGCGCA TGGTGCAGCA ACTCACGCTC
AAGGCGCTGG CGGAGCAGGC GGGCTGCTCG GAGAGTCTGT TGTCGAAGGT CGAGGGCGGT
CACGCGACGC CGTCGCTCGC GACCTTGCAC CGAATCGCGC TCGCGCTGGA CACCAACATC
GCTGCACTCG TGTCCGGTCC CGTTGCGACC GTCACGCCGA TACAGCGTGC GAGCGAACGG
CCTTCCGTGC GCTTTCCGGG GGCGCAGCAG ACGGCGGGCC GGCATGCTCG CGCGCGAAGT
TCGATCATGC TGGAACGGCT CGTCGTAGCG GGTCCCGGGC AACTGCTGCA AGGCGACATT
CACGTGCTCG AACCGCTCGC GCGCAGCGAC GAGCAGATCA GCCATGCGGG GGAAGAACTG
GGTTATGTGC TCGAAGGCGA ACTCGAACTG ACGCTCGGCA GCGAATGCTA CCGGCTGCAG
GCGGGTGATT CCTTCTACTT CCCCAGCACC GAGCCGCACA GCTACCGCAA TCCCGGCGAC
GTCATCACCC GCGTGCTGTG GATCAATACG CCGCCCACCT TCTGA
 
Protein sequence
MATRKTSTSS NGAARRPSSL APRRAAQAPR AAASHSAPGA AAEGLGTRLR HARMVQQLTL 
KALAEQAGCS ESLLSKVEGG HATPSLATLH RIALALDTNI AALVSGPVAT VTPIQRASER
PSVRFPGAQQ TAGRHARARS SIMLERLVVA GPGQLLQGDI HVLEPLARSD EQISHAGEEL
GYVLEGELEL TLGSECYRLQ AGDSFYFPST EPHSYRNPGD VITRVLWINT PPTF