| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5994 |
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| Symbol | |
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| ID | 6247565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 527884 |
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| End bp | 529218 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597701 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001862103 |
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| Protein GI | 186470785 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCATG ACGCCAACAT GGCGGTGACC GACCGTATCG AATGGTTTGA AGGCATGCTG
CTCTCGCCGC AGCATTTCCA GCAAATGGCG TCGCGTGTCG ATTCGCTCGT GGCCTGGCAG
ACGCTTGCCG CCGCGCCGTT CAGCTGGGGC GTCCGGCGTC TGGTGTTGGA CCACGGTCTG
CTCCCCGCGG GTCTGCTGCG CGTGCTCGAA CTCGACGCGA TCATGCCCGA CGGCACGGCT
GTGACGTATA GCGCCGAAGC GCAAGGCGCA GTGCGCCTTG AACTGTCGCT CGAACCCTTT
GCGGCATCGC TCACGAGCGG GCCGATCGAT TTCTATCTTG TCCTGCCCGT CGCGGGCACG
ATGCGCCGCA GCGCCCAGGT CAAACGCTTC CGTTCGAGTG CGGGTATGCC CGTCGAGGAT
CAGGTCTCTG ACGCACCGCC CGCCGATATC CCTCGCCTCA TGCCGAATCT CGCGCTTGCC
GCGGGCGAAT TGCCGTCGGC CATGCATGTC TACCTGCGCC TCGGCTCGCT ATACAGGGAC
AATGAGGTCG TACGGCTCGG CGAGCATTTG CCACCGTTGC TGGAAGTGGC GCGCGACAAT
CCGCTGTGGA CAAGCGTCGC GTCCCTGCTT GGGCAACTGC GCGGCAAGGC GGCGTTCGTC
GCGCGGCAGA CTGCGAATCC TTCGTCGAAG GTCGACGATC GCCTGACGCA ACTCGAACTC
AAGGACCGGC TGCGCAGCCT GCTGAGCGCG CTGCCGCTCG CAGAAGCCGT GCTGCGCACA
CCGCATCTTC ATCCGCTGTC GCTCTATCTG TCGCTGGCGT CGCTTAACGG ATCGCTCGCG
ATGCTCAAGC CGGGTGGCCT GCCGCCCGTG CCGCCCGACT ACGATCACGC GGACCCGCTT
TCTGTGTTCA CGCCGCTGTT GCGTTCGCTG CGCGAATCGA TGTCGGAAGT CAACGAAGCG
TATCGCGAGC ACAAGTTCGA ATTCCGCCAC GGGGCCTTCG AAATCGCGCT GCATCCGGAC
TGGATCGGCG AGCGTCTGGT GGTCGGCCTG CGCGGTCAGT CGGATCGCGA CCTGCTGGCG
TGGATGGATG GCGCCGTCAT CGGTTCTCAA TCGGTCTATG CGTCGTTGCG CAGCCGCCGC
GTGCTGGGCG CCGCGCGCCG CGGGATCGAC TATGCCGAGG ATCTCGGCCT GCGTTCGGGC
TCGGGGTATC TGCTCTTCGA AGTCGAGGCC GAGCACGCGC TGGTGCTGGC GAGCGAACTG
CTGGTGATCG GCAACCCCAA CGAGGGCGCG AGCGCGCAGC GGCCACAGGA AATGCTGCTG
TTCGTGAAGG GATGA
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| Protein sequence | MMHDANMAVT DRIEWFEGML LSPQHFQQMA SRVDSLVAWQ TLAAAPFSWG VRRLVLDHGL
LPAGLLRVLE LDAIMPDGTA VTYSAEAQGA VRLELSLEPF AASLTSGPID FYLVLPVAGT
MRRSAQVKRF RSSAGMPVED QVSDAPPADI PRLMPNLALA AGELPSAMHV YLRLGSLYRD
NEVVRLGEHL PPLLEVARDN PLWTSVASLL GQLRGKAAFV ARQTANPSSK VDDRLTQLEL
KDRLRSLLSA LPLAEAVLRT PHLHPLSLYL SLASLNGSLA MLKPGGLPPV PPDYDHADPL
SVFTPLLRSL RESMSEVNEA YREHKFEFRH GAFEIALHPD WIGERLVVGL RGQSDRDLLA
WMDGAVIGSQ SVYASLRSRR VLGAARRGID YAEDLGLRSG SGYLLFEVEA EHALVLASEL
LVIGNPNEGA SAQRPQEMLL FVKG
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