| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5961 |
|---|
| Symbol | |
|---|
| ID | 6247533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 488459 |
|---|
| End bp | 489571 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642597669 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_001862071 |
|---|
| Protein GI | 186470753 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0205836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGC AATCCATTCT CAACGCCCGT CATCGCGAGC TCGGTTCGAA GCTCGATGGC
GACTCCTGGA ACGACATGCC GATTCCCTGG TACTACTCGG GCGATCCGTA TGACGACGTG
GTGGCCGTGC GCACGGCAGC AGGCCTCTAC GACATCAGCG CGCTCAATAT CGTGCGCGTG
TCGGGTCCCG ATGCGGCAGC CGTGATCGAC AGCATCTGTG CGGTCGACGT GAGCCGCATG
AAGCCGGGCA CCGCGCGGCT CGCGGCCGAA GTCGACGAGC GCGGCGGGGT CTGCGACGAC
CTGATGGTGA TCTACGACGC TCCACAGCAT TTCAGGCTCT CGCATGGTGG CGGCACCACG
CAGTCGCTTC TCGAACGCGC AGCGCACAAG CGCAACGTGG AATGGCGCCA GGACTTCGAC
GTCCATATGC TGTCGCTGCA AGGTCCGCGT TCAACCGACA TCCTGCAGCC GCACATCGGC
ATCGAACTGA ACAAGCTGCC CTACTTCGCG CACGTCGAGA CCCAGCTCTT CGGCCGCAAC
ATTATCGTGT CGCGCGGCGG GTATTCGGGC GAACAGGGCT TCGAAGTGTC GTGCGCAGCC
GCCGACGCCG TCGCGCTGTG GGACGGCATT CTCGATGCGG GCAAGCCGCA CGGCGCCGTG
CCCGCATCGT GGATGTCGCT GGAAATCGCG CGCATCGAAG CCGCGCTGCT CTTCTATCCG
TTCGACATGC CCGAAGGCGA CACTACGCCG TGGGAGCTGA ACCTCGACTG GATGGTCGAC
CTCGACAAGG CAGGCGACTA CGTGGGCAAA GAGGCCCTGC TCGCGGCGCG CGGCAAGGAA
CGCGTGAAGC AGGCGGGCGT GGTCGTCAGG CACGACGCGG CCGTGAGCGC CGGTTCGCCG
ATCTACATCG GCGACGAGCA GGTCGGCGTC GTGACGAGCG CGATCTTCAG CCGCTATCTG
ATGCAGTCGC TCGCAATGGT GCACCTGAAG CCGAATCACA CGGCGCTCGG CACCAAGGTC
GAGATTCGCG ACGCGGCCGG CCAGTTCAGC GGCGTCGTCA GCAAGACACC GTTCTACGAC
CCGATGCGCC TGCGCACCCG CGTCGCCGCC TGA
|
|---|
| Protein sequence | MTRQSILNAR HRELGSKLDG DSWNDMPIPW YYSGDPYDDV VAVRTAAGLY DISALNIVRV
SGPDAAAVID SICAVDVSRM KPGTARLAAE VDERGGVCDD LMVIYDAPQH FRLSHGGGTT
QSLLERAAHK RNVEWRQDFD VHMLSLQGPR STDILQPHIG IELNKLPYFA HVETQLFGRN
IIVSRGGYSG EQGFEVSCAA ADAVALWDGI LDAGKPHGAV PASWMSLEIA RIEAALLFYP
FDMPEGDTTP WELNLDWMVD LDKAGDYVGK EALLAARGKE RVKQAGVVVR HDAAVSAGSP
IYIGDEQVGV VTSAIFSRYL MQSLAMVHLK PNHTALGTKV EIRDAAGQFS GVVSKTPFYD
PMRLRTRVAA
|
|---|
| |