| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5916 |
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| Symbol | |
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| ID | 6247488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 433939 |
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| End bp | 436905 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642597624 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001862026 |
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| Protein GI | 186470708 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.564133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGA CTCCTCATCG CGGCGAATGG ATCGAGCGCA ACACGCGCAT CGAGTTCTCA
TACGAAGGCA GGCCATACTC GGGCCTCGCC GGCGACACGA TCACCAGCGC ACTGTGGGCT
TCCGACGTGC GCGTGCTTGG CCGCAGCTTC AAGTATCACC GGCCGCGCGG CGTGCTGTCG
CTTGCCAATC ACGACGTCAA CGTGATGCTT CAGGACGGCC AGCGGCTGAA CGTGCGCGCC
GACGTGACAG CACTGACGCC GGGCGGCAAG TGGCATTCCG TCAACACGTT CGGCGGTGTC
GAGGCGGATC GCGCGCGCAT CGTCGGCAAG CTTTCGGCGT TCCTTCCTGT CGGCTTCTAT
TACAAGGCGT TTTATAGCAA GCGCTGGTTC CCGCGCTGGG AACGCATGTT CCGCGCGATG
ACGGGCCTCG GCACGGTCGA TTTCAATGCG CCGCATATCC GCACGCCGAA GCGCTACGGC
TTTTGCGACG TGCTCGTGAT CGGCGCAGGG CCGTCGGGCC TGTCGGCGGC GCTGGCGGCC
GCGCAAGCGG GTGCGGATGT CGTCGTCGTC GACGAGAACG CACGCGTCGG CGGCAGCGGC
GGCTATCAGC TGGGCGGCGA CGAGCAGCGC TTCGACGTGA GCCGCACGCT GGAAACGCAC
GTGCTCGGGC ATCCGCGCAT CCGCGTGATG ACGAACACGC TCGCGGCAGC CTATTACGCC
GATCTGTGGG TGCCGCTGGT GGACTCGACG CGCATCACCA AGATGCGCGC GAAAGCGGTG
ATCGTCGCGA GCGGCGCGTT CGAGCAGCCC GCCGTGTTTC GCAACAACGA TCTGCCGGGC
GTGATGCTGG CGTCGGCGGC GCAACGGCTT GCTTATCGCT ATGCCGTCGC GCCCGGCAAG
CGCGCGGTGG TGCTGGCCGC GAATGCCGAC GGCTATCGCG CGGCGCTCGA CATGCTCGCG
CGCGGCATCG AAGTAGTGGC CGTGGTGGAT TTGCGCGCGT CGCATGCGAG CGGCGATATC
GAACGCGAGC TCAGGACGAA GGGCGTCGAT GTAATGGCAT CGAGCTGCGT CGTCGAGGCC
GTAGCGGACA AAACAGGCGG ACGGCTGACG GGCGTGCGCG TCGGTGCCTT CTCGACACAA
AGCAGCTTGC GCGATTCGAC GGCAAACACG CGTCTGATCG AATGCGACAC GCTGCTGATG
AGCGTCGGCT GGGCACCTGC TGCGAATCTG CTGTATCAGG CGGGCACGAA AATGCAGTTC
GATCACGCGG TAGAACAGTT CGTGCCCGAG CAATTGCCGC CCGGCGTGTT CGCTTGCGGC
CGCGTGAATG GCGTGTACAC GCTCGGCCAC AAGCTGCAGG ACGGCGAGCG CGCCGGCCTG
CAGGCCGCGG CGCACTGCGG TTTCGGCGAC GGCAGGACGG CGGGCGCGAT GCAGGCGCGA
ATCGCGGAAC ACGAATCGCC GTCGCATCCG TGGCCGATCG TCGGCCATGC GTCGGGCAAG
AACTTCGTCG ATTTCGACGA AGACCTGCAG CTGAAGGATT TCGAAAATGC CGTGCAGGAA
GGCTTCGACA ACATCGAACT GCTGAAGCGT TTCTCGACCA ACGGCATGGG TCCGAGCCAG
GGCAAGCACT CGAACATGAA CGGCTTGCGC GTTCTTGCGC GGCTGACGGG CAAGGAGCCT
CAGCAAGTCG GCACGACGAC GGCGCGGCCA TTCTTCCACC CCGTGCCGAT GTCGCATCTC
GCCGGACGCG GCTTCAATCC GGAACGGCGC ACGCCGCTTC ATGCGCAGCA TCAGTTGCTC
AATGCAGTGT GGATGGCGGC TGGCGTCTGG CAGCGTCCGG AGTATTACGC CGTCGCGGGC
AAGGCGCGGG CGGCCTGCAT CGAAGAAGAA GCGCTCGCCG TGCGCAACGG CGTGGGCATC
ATCGATGTCG GCACACTCGG CAAGATCGAA GTGCGCGGAC CGCAGGCCGC CGAGTTTCTC
GAACGCGTGT ACGTGTCGAA GTACGCGGGG TTGAAAGCGG GCATGACGCG CTACGCCGTG
ATGTGCGACG AGTCCGGTGT CGTGATCGAC GACGGCGTGA TCGCGCGTCT CGCCGACGAC
CACTTCTATT TCACGACCAC GACCTCGGGT GCGGCTGCCA TCTATCGCGA GCTGTCCCGC
CTCAACACGA TCTGGCAGCT CGACTGCGGC ATCGTCAACG TGACGGGCGC GTTCGCAGCC
GTGAATCTCG CCGGGCCGGC GTCGCGCGCG GTGCTCAGCA AGCTCGTCGA TCTCGATCTG
TCGTCGGCGG CCTTCCCTTA TCTGGGCGTG CGCGTGACGG GCGTCACGCT CGGTCAGAAC
CGCGTGCCTG CGCGTCTGAT GCGAGTGGGT TTCGTCGGCG AATGGGGCTA CGAAATCCAC
ATCCCGGCCG ACTATGGCGC GGCCCTCTGG CGCGCGCTGC TCGAAACGGG CAACCCATAT
GGCGTGCGTC CGTTCGGCGT CGAAGCGCAG CGTCTGCTGC GGCTGGAAAA AGGTCACGTG
ATCGTGAGCC AGGACACGGA CGGCCTGACG ACGCCGCGCG ACGCGGGCAT GGCATGGGCC
GTGAAGATGG ACAAGCCGTT TTTCGTCGGC AAGCGCAGTT TGCAGATCAT CGATCAGACG
CCGGCCAAGC AGTGTCTCGT CGGCTTCGCG CTCGATGCGG GCGTGCGCGA CAGCAGTCTG
CGCGAGTGTC ATCTGGTGAT CGAACGCGGC GAGATTGCGG GGCGGGTCAC GAGCGTCGCG
TGGAGCGCGA CTCTGCAAAA GACCATTGGG CTCGCGTTTG TGCGGCCGTC TCAAGCTGAG
CCCGGCACGC GCATCACATT CCGTGCGAAC GGCGGCCGCA TGGTGTCCGC GACCGTCGTG
CCGACACCGT TCTATGACCC TGAGAGCGAG CGTCAGAAAG ACGCCGTAAC GATAACAGCA
GCTGCGCCGA GGAAGGAGAC AGCATGA
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| Protein sequence | MRLTPHRGEW IERNTRIEFS YEGRPYSGLA GDTITSALWA SDVRVLGRSF KYHRPRGVLS
LANHDVNVML QDGQRLNVRA DVTALTPGGK WHSVNTFGGV EADRARIVGK LSAFLPVGFY
YKAFYSKRWF PRWERMFRAM TGLGTVDFNA PHIRTPKRYG FCDVLVIGAG PSGLSAALAA
AQAGADVVVV DENARVGGSG GYQLGGDEQR FDVSRTLETH VLGHPRIRVM TNTLAAAYYA
DLWVPLVDST RITKMRAKAV IVASGAFEQP AVFRNNDLPG VMLASAAQRL AYRYAVAPGK
RAVVLAANAD GYRAALDMLA RGIEVVAVVD LRASHASGDI ERELRTKGVD VMASSCVVEA
VADKTGGRLT GVRVGAFSTQ SSLRDSTANT RLIECDTLLM SVGWAPAANL LYQAGTKMQF
DHAVEQFVPE QLPPGVFACG RVNGVYTLGH KLQDGERAGL QAAAHCGFGD GRTAGAMQAR
IAEHESPSHP WPIVGHASGK NFVDFDEDLQ LKDFENAVQE GFDNIELLKR FSTNGMGPSQ
GKHSNMNGLR VLARLTGKEP QQVGTTTARP FFHPVPMSHL AGRGFNPERR TPLHAQHQLL
NAVWMAAGVW QRPEYYAVAG KARAACIEEE ALAVRNGVGI IDVGTLGKIE VRGPQAAEFL
ERVYVSKYAG LKAGMTRYAV MCDESGVVID DGVIARLADD HFYFTTTTSG AAAIYRELSR
LNTIWQLDCG IVNVTGAFAA VNLAGPASRA VLSKLVDLDL SSAAFPYLGV RVTGVTLGQN
RVPARLMRVG FVGEWGYEIH IPADYGAALW RALLETGNPY GVRPFGVEAQ RLLRLEKGHV
IVSQDTDGLT TPRDAGMAWA VKMDKPFFVG KRSLQIIDQT PAKQCLVGFA LDAGVRDSSL
RECHLVIERG EIAGRVTSVA WSATLQKTIG LAFVRPSQAE PGTRITFRAN GGRMVSATVV
PTPFYDPESE RQKDAVTITA AAPRKETA
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