Gene Bphy_5888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5888 
Symbol 
ID6247460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp406982 
End bp407710 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID642597596 
ProductCBS domain-containing protein 
Protein accessionYP_001861998 
Protein GI186470680 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.361711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC GTCGTGCACA AGCCAAAGGA GCGATCATGC GCGCACTCGA CATCATGACT 
ACGTCCGTCG TCACGGCCAC ACCCGACATG TCGATCCACG ACGCGGCCAG ACTGTTCGTC
GACAACCGGA TTAGCGGCAT GCCTGTCGTC GACGGGGAAG GACAGGTCGT GGGTATCGTC
AGCCAGGGCG ATCTGCTGCA TCGCGTGGAG AACGGAACGG GTCACGGTAA GCGCCGATGG
TGGCTCGACT TTCTGCTGTC CTCGCCTCGC GAGCAGGCCG CGCGATATGT GAAGGAGCAC
GCCCATGTGG TCGGCGATGT GATGTGCGAC CGGGTGATTT CGATTACCGA AGACATGCCG
CTCGACAGGA TCGCAGATCT GATGGAACGC CGGCATCTGA AGCGCGTACC CGTGCTCAAG
GACGGCAAGC TGGTCGGAAT TGTGAGCCGT TCGAACCTGA TCCGTGCACT CGCCAGCGTC
GCCCCGCCGG CGGACGCCGC TGCGCATGAC GATGCGAGTG TGCGCGACGC GATCGTGCTG
GAAATGCATG GACAGCGCTG GGGACTTTCG AAACACGGCG TGATCGTCAA GGATGGGATC
GCGCATCTTT GGGGCGTCGT CGAGTCGGAA GAGGAAAAGC GCGCCATCTG CATCGCCGCC
GAACGGGTAC CGGGCGTCAA GCGCGTGGAG CATCACCTCG AGTTTCCAAA CGTGATACCG
ACACTGTAG
 
Protein sequence
MTTRRAQAKG AIMRALDIMT TSVVTATPDM SIHDAARLFV DNRISGMPVV DGEGQVVGIV 
SQGDLLHRVE NGTGHGKRRW WLDFLLSSPR EQAARYVKEH AHVVGDVMCD RVISITEDMP
LDRIADLMER RHLKRVPVLK DGKLVGIVSR SNLIRALASV APPADAAAHD DASVRDAIVL
EMHGQRWGLS KHGVIVKDGI AHLWGVVESE EEKRAICIAA ERVPGVKRVE HHLEFPNVIP
TL