| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5833 |
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| Symbol | |
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| ID | 6247406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 340755 |
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| End bp | 342224 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642597542 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001861944 |
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| Protein GI | 186470626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.103797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTT CGCCGGGCCC TGCCGTTCGC GTGTTCGATG CCGTGAAAGC GCTCGCCTTC
ATCGGCGATC TGAGCATGGG ACAGCCGACC GACCATTCCA TCCGCACCGC GTGGCTCGCC
GTGCGCCTCG CGCGCGCCGC CGAACTCGAC GACGCCGCCG TCGCCGTGTG CGAGGCATCG
CTGCTGCGCT GGTCAGGTTG CACGGCGAAT GCAGCGGGCT TTGCGGAAGC GACGGGCGAC
GACGTCGCGA GCCGCGAAGC GATGCTCGCG CTCAAGCCCG ACTGGGCAGG ACCTCTCGAG
CTGCACGCCG ATCTCGGCGC CGTCATCGCG CCGCTCGCGC GCATCCATTG CGAAGTATCG
AGCGAAGCGG CGCGCATGCT CGGCCTCGGT CAAGACACGA GGGCCGCGCT GCGGCATGTG
TTCGAGTCGT GGGATGGCAG TGGCTCGCCC GACCACCTGG CAGGCAATGC AGTGCCCGCC
AGCGTATTCA TCGTGGCGCT CGCCGGCGAA CTGGAGATCT TTTCGCGCAC CTACAACATC
GAGCGCGCTC GCGCACTGAT CGGACAGCGC GCTGATTCGC GCTATCCCGA CAAGCTCGCG
CGCCTCGCCA TCCGGCTCGC GCCAGATTGG CTCGACGAAC TCGAACACAC TGACGCCGCG
TCCATCGACG CCGCGCTACT AACGCCCAAC ATGAGCGATG CTACGCCCGT CGAACTGGTC
GCCGACATCA TCGATCTGAA ACTGCCCTGG ATGACGGGCT ATTCACGCAG CGTCGCGGCG
ACGGCTGCGT CGTGTGGCGC ACGCCTCGCG CTCGATTCGA ACGCGCAGCA TCGCCTGTAT
TGCGCAGGGC TGATTCACGG CATGGGGCGC GCGGCCGTGC CGAATCCCAT CTGGAACACC
CCGTCGCGTC TGTCGCAGGC CGCGTGGGAG AAGCTGCGTC TCGTGCCGTA CTGGACCTCG
CGTGCGGGCA GGCAAACGGG CACGCTCGCC GAAGGCGCCG AACTCGGCTC ATATGTGTAT
GAACGGCTCG ATGGCTCCGG GTATTTTCGT GGCGCTTCGG GCGCGGCGTT GCCGGTCGAA
GCGCGCATTC TGGCCGCTAG CGCGACATGG GTCGCATTGC GTGCTGCCCG TCCTTGGCGC
GCTGCAATGA CGGACCGCGA GGCCGCGAAG CTGATGCAGG AAGAAGCCGC ACAAGGTCGC
TACGATGCCA GCGTGGTCGA TGCGCTGATC GATGCGGGCA CTTCGCAGCG GCGCGTCGTG
AATCCGCGCG CACATAACGC GCGTCTGTCC GCTCGCGAGA TCGACGTGCT GCGCGGCATT
TCCCAGGGCG CGAGCAACAA GGAAGTCGCC CGCGATCTAT CGTTGAGTCC CAGCACGGTG
CGCACGCATG TCGAAAGCGT GTTTCGCAAG CTCGATTGTT CGACGCGCGC AGCCGCCACG
CTCAAGGCGC TGGCGCTCGG ACTGCTTTAG
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| Protein sequence | MQTSPGPAVR VFDAVKALAF IGDLSMGQPT DHSIRTAWLA VRLARAAELD DAAVAVCEAS
LLRWSGCTAN AAGFAEATGD DVASREAMLA LKPDWAGPLE LHADLGAVIA PLARIHCEVS
SEAARMLGLG QDTRAALRHV FESWDGSGSP DHLAGNAVPA SVFIVALAGE LEIFSRTYNI
ERARALIGQR ADSRYPDKLA RLAIRLAPDW LDELEHTDAA SIDAALLTPN MSDATPVELV
ADIIDLKLPW MTGYSRSVAA TAASCGARLA LDSNAQHRLY CAGLIHGMGR AAVPNPIWNT
PSRLSQAAWE KLRLVPYWTS RAGRQTGTLA EGAELGSYVY ERLDGSGYFR GASGAALPVE
ARILAASATW VALRAARPWR AAMTDREAAK LMQEEAAQGR YDASVVDALI DAGTSQRRVV
NPRAHNARLS AREIDVLRGI SQGASNKEVA RDLSLSPSTV RTHVESVFRK LDCSTRAAAT
LKALALGLL
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