| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5670 |
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| Symbol | |
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| ID | 6247175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 157281 |
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| End bp | 158870 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642597387 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001861789 |
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| Protein GI | 186470471 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.981037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTT CTTTTCGCAA ACCAGTCGCA GTGGGTCGCA GCTTCACGCC GATGCTCGCG
CTCGTCGTTG CCGTCGTGTG CGGTGTGTGC GTGCTCGTCA CGGCCGCGTT GTGGGCGCGT
CATGCGGACC AGGCGGCCAT TCGCGAACGC GAGAGCCTGA TTGCAGGCGA CATGGTCGCG
TCAATCGACC GGATTCTCGA CAGCGTGATA TCACGCGCGC ACTCCGGCTT GGCGACACTG
CCGGGACGCC CCTGCCCGCT CGTCGAACAT CGCCTGTCCG AGCTGCAGAC CTACGTGCTG
TATGTGCGCA GCGTCAACCT TGTGGCGAAT CAGAATATCT ACTGTTCTTC GGCGCTGGGC
AGCATCGATA TGCCGCTCGC CGCCTATCTG TCGCTCGCGC CGGCGCGCAT CGAACTCGAC
CTGATCGCAG GCACGCCGCA ACAGCCGCGG GAGCCCGTCA TGCCGCTGTA TGTTCCGACG
AGCAAGGACA CGGGCCTGCT GTATGTGGTC GAAGCGCGCT ATCTCGCCGA TACGCTCGCT
CATGGCGTGC GCTATGAAGC CGGTCAGGTG GTGTTGGTCG TATCGAATGC GCGAGCGCTG
GACGCATACG GCGAAGTGAT TTCCGCCGAA AGCGCCGCCA AGTGGAAAGG CACGCGTGCG
TCTTCGGCGC GCTGGGCCTT TTCGATCGTC GTCGTGGCCG CGCCCGCGTT CGTTACGCAA
ACGCACTGGA AATACGGGCT GCTGGCGAGT GCAGCAGCCA TTCTCGTGAA TCTGCTGATC
GCAGCCGCGT ACCTGATCGC CTTCGCGCCG CGCCGGCTGC TGCTGTCCGC CGTGCGCCGC
GCGCTGAAGC ATGGGCAATT GCACTTCGCG TATCAGCCCG TCGTCGAGAT CGCCACACGC
CGCATCATGG GCGTCGAAGC GCTGATACGC TGGACGCATC CGCGATGGGG CGCCGTGAGT
CCCGCCGCGT TCATGACGGA AGTGGAGCGC AGCAGCCTGC TCGCGAGCGT CACGCGCTTC
GCATTGCAGC GTGCGACCGA AGAAATCATG CGGAAAACGG AGCTCCGTCC GTTGCGCATC
GCCGTCAACG TCGCGCCGAT GGATCTCGAG CGCAAGGACT TCGTCGCGGA CGTGCTGGCC
GTTCATGCAA CACTTCCCGC CGACATCACG CTCGTCCTCG AAGTGACCGA GCGCTTCCTC
ATCGACAAGC ATCCACGCAC CGACGTGATC TTCAACCTGC TGAAGGCGCA GGGCGTGCGC
TTCGCGATCG ACGACTTCGG CACGCAGCAT AGCAACCTCG ACCTGCTAGG CCGCTTCCCG
TTCGACTATG TGAAGATTGA CGGAGAGTTC GTGCGGCAAG TCGACAAGCA GGGCGGCGAG
CTGATTCGCG CGATCGCCGC CGTGTCGAAG CATTACGGCA TGGAAGTCAT TGCGGAAGGC
GTCGAAACGC AAGCGCAGCA TGAAGCGCTG CGCAGCCTCG GCATTCCGTA CGGACAAGGT
TATCTGTATC AGCGCCCCGT ACCGGCCTCG CGGCTTTTCG TCGATACGGG CGCGAACGTG
ATTGCGACGA AAACACACGT CACGCACTGA
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| Protein sequence | MLFSFRKPVA VGRSFTPMLA LVVAVVCGVC VLVTAALWAR HADQAAIRER ESLIAGDMVA
SIDRILDSVI SRAHSGLATL PGRPCPLVEH RLSELQTYVL YVRSVNLVAN QNIYCSSALG
SIDMPLAAYL SLAPARIELD LIAGTPQQPR EPVMPLYVPT SKDTGLLYVV EARYLADTLA
HGVRYEAGQV VLVVSNARAL DAYGEVISAE SAAKWKGTRA SSARWAFSIV VVAAPAFVTQ
THWKYGLLAS AAAILVNLLI AAAYLIAFAP RRLLLSAVRR ALKHGQLHFA YQPVVEIATR
RIMGVEALIR WTHPRWGAVS PAAFMTEVER SSLLASVTRF ALQRATEEIM RKTELRPLRI
AVNVAPMDLE RKDFVADVLA VHATLPADIT LVLEVTERFL IDKHPRTDVI FNLLKAQGVR
FAIDDFGTQH SNLDLLGRFP FDYVKIDGEF VRQVDKQGGE LIRAIAAVSK HYGMEVIAEG
VETQAQHEAL RSLGIPYGQG YLYQRPVPAS RLFVDTGANV IATKTHVTH
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