| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5612 |
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| Symbol | |
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| ID | 6247275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 79726 |
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| End bp | 82044 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597330 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001861732 |
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| Protein GI | 186470414 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGA CCCCAGCCAT TCCGTTCGCC CAAAACAAAC CGAATCCCGG CGCGTTCATC
GGCGCCGCAC CCGCGTTCCG TCAACTGGTC CGTCTGATCG ACCGCGTCGC GCCCACCGAT
CACGCATTGC TCATCTTCGG CCCGACGGGT TCGGGCAAGG AACTCGTCGC CCGCCGCGTG
CACCTGCGCA GCCTGCGTCA CGACCAGCCA TTCGTCGACG TGAATTGCGG CGCGATTCCC
GAGCATCTCG TCGAAGCCGA ACTGTTCGGC CACGTGAAAG GCGCCTTCAC GGGCGCCGCT
GAGAATCGCC AGGGACTTTT CCAGCAGGTC GGCAAAGGCA CGCTTCTGCT CGATGAAATC
GGCGAACTGC CGCTCGCGCT GCAACCGAAG CTGTTGCGCG TGCTCGAAAC CCGCACCTTC
CGTCCGATCG GGTCGTCGAC CAATCTGCGT TTCGAAGGAC GCGTCGTCGC ATCGACGCAC
CGCGATCTGC GCGAACTGTC GCGCGAAGGC CGGTTCCGCG AGGACCTCTT CTATCGGCTC
GCAGTCTTCG TACTCGCCGT GCCCGGACTG GAGCAGCGCG CCGAAGACAT CCCCGCGCTC
GTCGCGCATT TTGCTTCGTT GCAGCCACGC AGCCTGGAGT TCTCGCCCGC CGCCATCCGA
CGGCTCAGCC AGCATGCGTG GCCAGGACAC ATCCGGCAGT TGCGCAATCT GATCAGTCAG
TTGAGCGTGC TGGCCGAAAA CACAATGATC GACGTCGACA CGCTGGAGCC GTTTCTCGCC
AACGAAGCAG CCGGCCCTGT TTCGCGCGCG AGCCTCGCGG ACATGCTGCT GCAACTCGAC
GGACGCGACA AACTTGCCGT CGCCGAAGAT CTGCTGATCG ACCGCGCGCT CGAACGCTCC
GCCGGCAACA AGAGCGCCGC CGCGACACTG CTGGGCGTCG GCCGCAAGAC AATCGAGCGG
CGTCTGAAGT CGCGCCAGGA ACATCACCGC GTGGCCCACA AGTGCCTCGA ACATGCGACG
GCGCTTGTTG CCGAATCGCG TTTCGCGGAG GCCATTCCGC CGTTGCGCCG CTGCCTCGAC
GTCTTGCAGG CGAACAACGA GCAGGACTCG GTGCGCCGTC TGCAGTTCGA CGCCTACCGG
CTGCTCGGCA TGAGCCTGCG CAGCGTGCAC GGGTGGCTCT ATGCCGAGGC CACCGCCTGC
TACGCGGCCG CCTTGTCGAT TGGCGAAGGC ATTTGCGAGC CTGCCGAGAT CGCCGCGATC
CAGTTCGGCG TGTGGACGAC GCAACTGACG ACGCTGCAAC TCAAGCAGGC GCGCGCGACT
GCGCAGGACA TGCTGCAACG GGCGCAGAAC AGCGGCGACC GCGTGTCGCT CGACGAAGCC
CACGTCGCGA TGACCAACAC GCTCTTCTGG CTCGGCGACA GCGAAGAAGC GCTGGCCTGC
CTCGCACGCG GCAATCTGCT CGGCGTGGGG CGCCATGACA CGCGCACCGG CTCGCAGGGC
ATCGACCTCG CCAGCCTCGC GCTAACGTTC GAAGGACTCG CCGCGTATCA GATCGGCGCG
TTCGCGCAGG CGCGGCAAGC GATGGAGATG CTGATCGCGC GCGCATCGGA GCCCGGACCT
CACGCGTTCG CACACGCCGT CAATCTGCAA GGCGCCTCGT GGCTAGCCAC CCTGTTCGAC
GACCAGGATC GCCTCGGGCG TCTGGCGAGC GAACTCGAAA CGGTGTCGAT CGCGAACGGC
TTCGCGTTTT ACCGGGGCGT CGGACAAATC CTCCGGGCCG TGCATCTCAG CGCGCGCGGC
CATTCCGACG AAGCGGAGAC CATCATGCTC GATGGCTACG ACAATCATGT CGTGTGCAAC
GGCGGCGCGC TGTTCTATTC GTTCATGGCG TGGCAGCACG GGGAATTGCT GCTGCGCGCC
GGCCGCGCGC AGAACTGCAA CGCGATGCTC GCCTCGGCCG TCGACGAAAC GCTCGCACGT
CAGGAGCGCG TGTATCTCGG CGAACTGCTC GTCACGCGGG CGCGCGCGCA ATGGGCGCTC
GGCGATCTGA CGGCTGCCGA ACAGGGACTG CGCGCCGCGC TGTCGACGGC GCTCGCGTTC
GGCTCGGTGC CCGCGCGAGT GGACGCCGCG CGCTATCTCG CCACTTTGCT CCGATCGACC
GGCCGCCACG CCGAAGCGAT CGACACACTC GAGCGCGGAC TGCGCGCGCT GCCAGCAGAC
CCGACACCCC GGATCGCCAG CGCTGCCGCC TTGCTCGCTG AACTCCGGCA AGAGGTTTCT
CTCGACAATG ACAACGAAGG AATCGCACAT GGCCTATGA
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| Protein sequence | MSSTPAIPFA QNKPNPGAFI GAAPAFRQLV RLIDRVAPTD HALLIFGPTG SGKELVARRV
HLRSLRHDQP FVDVNCGAIP EHLVEAELFG HVKGAFTGAA ENRQGLFQQV GKGTLLLDEI
GELPLALQPK LLRVLETRTF RPIGSSTNLR FEGRVVASTH RDLRELSREG RFREDLFYRL
AVFVLAVPGL EQRAEDIPAL VAHFASLQPR SLEFSPAAIR RLSQHAWPGH IRQLRNLISQ
LSVLAENTMI DVDTLEPFLA NEAAGPVSRA SLADMLLQLD GRDKLAVAED LLIDRALERS
AGNKSAAATL LGVGRKTIER RLKSRQEHHR VAHKCLEHAT ALVAESRFAE AIPPLRRCLD
VLQANNEQDS VRRLQFDAYR LLGMSLRSVH GWLYAEATAC YAAALSIGEG ICEPAEIAAI
QFGVWTTQLT TLQLKQARAT AQDMLQRAQN SGDRVSLDEA HVAMTNTLFW LGDSEEALAC
LARGNLLGVG RHDTRTGSQG IDLASLALTF EGLAAYQIGA FAQARQAMEM LIARASEPGP
HAFAHAVNLQ GASWLATLFD DQDRLGRLAS ELETVSIANG FAFYRGVGQI LRAVHLSARG
HSDEAETIML DGYDNHVVCN GGALFYSFMA WQHGELLLRA GRAQNCNAML ASAVDETLAR
QERVYLGELL VTRARAQWAL GDLTAAEQGL RAALSTALAF GSVPARVDAA RYLATLLRST
GRHAEAIDTL ERGLRALPAD PTPRIASAAA LLAELRQEVS LDNDNEGIAH GL
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