| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5566 |
|---|
| Symbol | |
|---|
| ID | 6247230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 30689 |
|---|
| End bp | 31639 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642597285 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001861687 |
|---|
| Protein GI | 186470369 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0372777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACG CCACCTCCGT GACATCGGCG TTCATCTCTT CAGACATGGA CCGGCTTCAA
GCAATGACCA CGTTCGTGAC CGTGGTCGAG ATGGAAGGCT TCGCGTCTGC GGCGCGCAAG
CTCAACGTGT CGCCATCGGT CATCAGCCGG GTGATGACTG AGCTCGAAGA ACATCTGGGC
GTGCGCCTGT TGACGCGTAC GACGCGCGTC GTGCGCATGA CCGATGCGGG CGCGACGTTC
TTCGAACATT GCCGCCGCAT CCTCGCGGAC GTCGAAGCCG CCGAGCTTTC CGCTGTCGGC
GTCAACACCA CGCCGCGCGG CCAGTTGACG GTGACAGCGC CCGTCCTGTT CGGCAAGATG
TATGTCACGC CCATCGCTCA GGACTATCTG ACGCGCTATC CCGCCGTCAG TCTGAACTGC
TGGTTCATGG ACCGCGTCGT GAATCTCGTC GACGAAGGCG CCGATGTGGC GATACGCATC
GGTGAGTTGC CGAATTCGTC GTTGCAGGCA ATCGCCGTGG GCCATGTTCG GCGTGTGCTG
TGCGCGTCAC CCGGGTATCT GGAAACGCAC GGCGTGCCGC AACATCCCGA CGACCTCGCG
TCGCATATTG CCATTCAGGC GACGGGCCTC ACGCCTGCGC CGGAATGGCG CTTTCACGTG
GACGCCAAAC CGCTGACCGT GCCGATCCAG CCGCGCCTCG TGACCACCAC CAACGACTCG
GCGATCGCGG CGGCAATCGC GGGCCTGGGC CTGGTGCGAG TGCTGTCCTA TCAGATCGCG
GAGGAACTGG CGAACGGCAC CTTGCGAATC GTGCTCGCCG ACTGCGAGCA AGCGACGCTG
CCCGTTCATG TAATGCATCG CGAGGGCAAG CACGCGAACC AGAAGGTGCG CGCGTTCCTC
GATCTCGCGA TCGAAACGCT CAGGGCAAAG GCTTCGCTGT GGCTTGCATA G
|
|---|
| Protein sequence | MLDATSVTSA FISSDMDRLQ AMTTFVTVVE MEGFASAARK LNVSPSVISR VMTELEEHLG
VRLLTRTTRV VRMTDAGATF FEHCRRILAD VEAAELSAVG VNTTPRGQLT VTAPVLFGKM
YVTPIAQDYL TRYPAVSLNC WFMDRVVNLV DEGADVAIRI GELPNSSLQA IAVGHVRRVL
CASPGYLETH GVPQHPDDLA SHIAIQATGL TPAPEWRFHV DAKPLTVPIQ PRLVTTTNDS
AIAAAIAGLG LVRVLSYQIA EELANGTLRI VLADCEQATL PVHVMHREGK HANQKVRAFL
DLAIETLRAK ASLWLA
|
|---|
| |