| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5501 |
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| Symbol | |
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| ID | 6246985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2652410 |
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| End bp | 2653750 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597221 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001861624 |
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| Protein GI | 186474282 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.321454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGG ACAATCCAGC GCTTGACCGC AACCGTAAGA CGCCCGTAAC GCGCCGCCGC
CTGCTGTTCG TGGCCGGCGC GACCGTGCTG CTGGCGGCGC TGGGGTGGGG CCTCTACACG
GTGATCGAGC CGGCTTTTCA GACCCGCATC GTCATCACGA CGGGCGCGGA CAACGGCATT
TATCGGGGCT TCGCCGAGCG CTACGCGCCG TTGCTCAAGC GTGATGGCGT GACGCTCGAC
ATCCGCAGCT CGACGGGGTC GGTCGAGAAC TACCGGCGTC TGAAGGATCC CGCGAGCGTA
TATCAGGTCG GCTTCATTCA GTCGGGCACC ACCGTGCCCC AGGAAACGGA TCAGCTGCAG
ACCATCGCCG CCGTTTCGTA TGAGCCGATC TGGGTGTTCT ATCGCGACGC GTCGACCGTC
AACCGTCTCG CGCAACTGCG CGGCAAGCGG ATCGGCGTCG GTGTGCCGGG CAGCGGTTTG
CTGGAAGTGT CGCGGGTCTT GCTCGGCTAT AGCGGTATCA CGCGCGACAA CACACAGCTC
GTCGAAACGG ACGCGCCCAA CGCGTTGCGT TGTCTCCAGG AAGGCTGTCT GGATGCCGCG
TTCTTCATCG GCAGACCGGA TGCGCCGATG CAGCAGACGC TGCTGAACAG CGACCTGAAG
CTGATGAGCT TTGCCCAGGC CGACGCACTG GTGCAGAAGT TTCCATCGTT GAAGAAGGTG
ACGTTTCCGC GCGCGTCGAC GAGCATCGTC AACGACAGTC CGCAAGCGGA CGTCACTTTG
CTGGCCGCGA CCGCGCTGCT CGTCGCGAAG GACACGCTGC ATCCGGCGCT CGTCTATCTG
TTGCTCGACG CCGCGAAGAA CGTGCATGCG GGAGAAGACT ACTTCACGTC GCTCGGGGCG
TTTCCGAATC TCAACACCGG CGAATTTCCC GTCTCCAACG AGAGCGAGCG CTATTTCAAG
TCCGGCCGTC CGTTTCTGCA GCGCTATCTG CCGTTCTGGC TCGCGAGTTT CGTCGAGCGG
CGCCTCCTGA TTCTGGTGCC GTTCCTCGCC GTGCTGATCG GCGCGATGCA GGCGCTTCCC
CGCATGCTGG AGTCGCGCAT CAAGAAGCGC TTCGTGATCG GTTATCGCGC GCTCAAGCGG
CTTGAAGACG AAATCTGGCA AACGCCTCAG CCGTCGGCCC AGCAGGTCGC GACATGGCGC
GACGAGATCG AGCACGTCGA CGCACAGGCG AGCCAGATAC GCGTGCCGAC ACGCTATCTG
CACGACGTCT ACGCGCTGAA GCAGGCGATC GGCGTGGTGC GGCACCGTAT CTCGATGGCG
GCGGCGAGGC TGAACGGTTG A
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| Protein sequence | MPRDNPALDR NRKTPVTRRR LLFVAGATVL LAALGWGLYT VIEPAFQTRI VITTGADNGI
YRGFAERYAP LLKRDGVTLD IRSSTGSVEN YRRLKDPASV YQVGFIQSGT TVPQETDQLQ
TIAAVSYEPI WVFYRDASTV NRLAQLRGKR IGVGVPGSGL LEVSRVLLGY SGITRDNTQL
VETDAPNALR CLQEGCLDAA FFIGRPDAPM QQTLLNSDLK LMSFAQADAL VQKFPSLKKV
TFPRASTSIV NDSPQADVTL LAATALLVAK DTLHPALVYL LLDAAKNVHA GEDYFTSLGA
FPNLNTGEFP VSNESERYFK SGRPFLQRYL PFWLASFVER RLLILVPFLA VLIGAMQALP
RMLESRIKKR FVIGYRALKR LEDEIWQTPQ PSAQQVATWR DEIEHVDAQA SQIRVPTRYL
HDVYALKQAI GVVRHRISMA AARLNG
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