Gene Bphy_5489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5489 
Symbol 
ID6246973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2636422 
End bp2637048 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID642597209 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001861612 
Protein GI186474270 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.324839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CGGTGCGCGA CGAGGTTGAC GAAGGTTCCG TGCGCTTGCC TGTCGGCAGC 
GCGGGCGAAC GTTCGGGCGG CTGGTTCGGA TGCCTCGCGC TGATCGTCAC TGAAGGCTCG
TTATTCGGTT ATCTGATCTT TTCGTATCTA TACCTCGCAT CGCAAAGCGG TAGCCTGTGG
CCGCCCGAAG GTCTGCCGAA GCTCGGGCTC GGCGTCGCGA ACACGGCGAT CCTGCTGTCG
AGCAGCGTGT TTGTCTGGCT GTGCGAGCGC TTCGTGAAGC GGCGGCGCCT GTATTGGGCC
GTGGCAGCGA TGAGCACGGC GCTCGTGCTC GGCGTGATCT TCGTCGGCAT TCAATTGAAG
GAGTGGGGCA ACCATCCCTA TGGTCTGACC GCGCATCTGT ACGGCTCACT GTACTTCACG
ATCACGGGCT TTCACCTCGC GCACGTCGCG GTGGGGCTGG TCGTGCTGTC GCTGCTGTTG
CTCTGGACGG CGCTCGGTTA CTTCGACGAG AGACGTTGCC TCGCGCTGAC GATCGGCGGG
TTGTACTGGC ACTTCGTGGA TCTCGTATGG CTCTTCATCT TCACGACGAT CTATCTGTCG
CCGTACCTGC TACGGAGCCG CGCATGA
 
Protein sequence
MSDTVRDEVD EGSVRLPVGS AGERSGGWFG CLALIVTEGS LFGYLIFSYL YLASQSGSLW 
PPEGLPKLGL GVANTAILLS SSVFVWLCER FVKRRRLYWA VAAMSTALVL GVIFVGIQLK
EWGNHPYGLT AHLYGSLYFT ITGFHLAHVA VGLVVLSLLL LWTALGYFDE RRCLALTIGG
LYWHFVDLVW LFIFTTIYLS PYLLRSRA