Gene Bphy_5478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5478 
Symbol 
ID6246962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2627136 
End bp2627708 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content63% 
IMG OID642597198 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001861601 
Protein GI186474259 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.412083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.963239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAC CCGGCGACAA CTCATCGGGG ATCGACTTCG GAGTGAACGA CTGGGCGACT 
TTCAACGGTC TGGACCAGAA AATAATCGAC GCATTGTGTG CCGATGCGCG GATTCCGCTC
GCGGTGCTGG CCGACAGGAT CGGTGTGTCC CGGCAGGCGG TCCGCAACCG AATCGACCGG
CTCGAAGCGC TGAAGATCAT TGCAGGCTAT ACCGTGCGGC TCGCGTTGCC CGACGACATC
GCGCCCGTGG GTGCCGTGAT GCTGGTTTAC CGCAAGGACC GGATGCGCGG CGCGGACGTG
CTTGCCGCGC TCGAACGGAT CGCCGAGGTG CGCGATTGCG CGGTCCTCAG CGGCGAGGTC
GATTTGCTTG TGCAGATCGA GGCAGCCACA CACGAGCGGA TCAGCGACAT CTGGGCGACG
ATCAGTACGC GACCGTGTCT CACGGTCCTG CTGGACGGAT TTCCGCCTCT GTTCGTGAGC
CCACGCTGGG GTCATGCCAC CAAGGCCCTC CCGTTTGTCG GGATCGGACC TGGAATCGGA
ATCCGTTGTC ATGGAGTTGC CTGGAGACGG TAA
 
Protein sequence
MRRPGDNSSG IDFGVNDWAT FNGLDQKIID ALCADARIPL AVLADRIGVS RQAVRNRIDR 
LEALKIIAGY TVRLALPDDI APVGAVMLVY RKDRMRGADV LAALERIAEV RDCAVLSGEV
DLLVQIEAAT HERISDIWAT ISTRPCLTVL LDGFPPLFVS PRWGHATKAL PFVGIGPGIG
IRCHGVAWRR