Gene Bphy_5347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5347 
Symbol 
ID6246832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2487115 
End bp2487867 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID642597068 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001861471 
Protein GI186474129 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.097808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAA CAGTCTTTCT GGCAGGCGCA GCAGGCGCAA TCGGCAGCGC ACTGGTGCCG 
CTGCTGGTCG AGGCGGGCTA CACCGTCTAC GGCAGCACAC GCCGCCCCGA GCGCGCGGCG
CAGATCGAGC GGGCGGGTGC GACGCCCGTC ATCGTCGACG TATTCGACGC GCAAGCGTTG
AAGGACGCAC TGCTGCGTAT CGAACCCGCC GCCGTGATCC ATCAGTTGAC GGACCTGCCG
CCCGCGCTCG ACCCCGCGCG CATGCCGCAA GCCATCGCTC GCAATGCGCG GATACGCGAC
GAAGGCACGC GCAATCTGCT CGCCGCCGCG CTGGCGGCAG GCAGCAAGCG TTTCGTCGCG
CAAAGCATCG CGTGGGCCTA TCGCGAGGGC ACGCAACCGT ACGAAGAAAC CCAGCCGCTC
GATACGGACG CCGAGGGCAG CCGGCTCGTC ACGGTGCGCG GCGTCGCATC GCTCGAAACA
CAGGTGCTGA CCGCGCCGCT AATCGGCACA GTGCTGCGAT ACGGGCAACT GTATGGTCCC
GGCACCGGCT CCGAGCATGC AAGAGGCGCG AGCCCGGTTC ATGTCGATGC AGCCGCACAC
GCCGCCGTGC TCGCACTAAA ACATGCGCGA GCCGGTGCGT TCAATATCGC CGAGGACAAT
GCCGTTGTAT CGACCGGCAA GGCCAGGCGC GAACTCGGCT GGTCGGCGCT CTGGCGGCGC
ACCGCTGCCG TTGCGACGAG CACGGCAAGA TGA
 
Protein sequence
MKRTVFLAGA AGAIGSALVP LLVEAGYTVY GSTRRPERAA QIERAGATPV IVDVFDAQAL 
KDALLRIEPA AVIHQLTDLP PALDPARMPQ AIARNARIRD EGTRNLLAAA LAAGSKRFVA
QSIAWAYREG TQPYEETQPL DTDAEGSRLV TVRGVASLET QVLTAPLIGT VLRYGQLYGP
GTGSEHARGA SPVHVDAAAH AAVLALKHAR AGAFNIAEDN AVVSTGKARR ELGWSALWRR
TAAVATSTAR