| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5340 |
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| Symbol | |
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| ID | 6246825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2478412 |
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| End bp | 2479608 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642597061 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001861464 |
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| Protein GI | 186474122 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.916996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0339221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA CGATGTTGCT TACCGATGTC CGCATGCCGG ACGGCGTGCG CGTCGATGTC
GCGATCGCCG AGGGCCGCAT CGCTGCGATC GGTCCCGATT TGCAGGTCAA ACATGAGGTG
GCGCGCGAGC ACGGCAACGG TGCGTTGCTG CTGCCCGGTT TTGTAGAAGG CCATACGCAT
CTCGACAAGA CCATGTGGGG CATGCGCTGG TATCGCAACG AAGTGGGACC CACGCTCACC
GATCGCATCG ACAACGAGCG GCGCTTTCGA GCGCAGAGCG GACACGACGC GGCGGCGGCA
TCGCTTGCGT TGGCGCACGC GTTCCTGCAA ATGGGCACCA CGCGTTTGCG CACGCACGTC
GATATCGACA CGGATGCGGG GCTCAAGCAC CTCGAAGGCG TACTGACGAC ACGCGACGCG
CTCGGCGACG TCCTCGACAT GCAGACCGTT GCGTTTCCAC AGTCGGGCAT GCTCATCCGT
GAGGGCACCA TCGCGTTGCT CGACGATGCA TTGCGTGCGG GCGCCGACGT GCTCGGCGCG
CTGGACCCAG CGCTGATCGA CGGCGATCCC GTCGCTTCGC TGAACGCCAC CTTCGATCTC
GCCTCGCGCC ATCACAAGCC GATCGATATT CATCTGCACG AGCCCGCCGA AATCGGCGGT
TTCACATTGA AGCTGCTGCT CGACCGTGTC GAAGCGCTCG GCATGCAGGG ACGCGTCGTG
ATCAGCCATG CGTTCTGTCT CGGCGCGCTG GCACCGCGCG AGCGCGATCC GCTGCTCGAA
CGGCTCGCAC GACTCGACGT CGCGTTGCTC ACGACGGCGC CCGCCTCCGT TACCGTGCCG
CCGCTAGCCG CGTGCATCGA AAAAGGTGTC ACGCTGTTCG GCGGCAACGA CGGCATCCGC
GACACCTGGA ATCCGTTTGG CTCGCCCGAC ATGCTGGAGC GCGCGGCGCA GATCGCGATG
CGCTACGACC TGCGCCGCGA CGATGCGATC GCCGTCGCGT TCGATTGCGT GAGCCACGCC
GCCGCTCGCG GTTGCCAGTT CACCGACTAC GGCCTGCATG TGGGCGCACG TGCCGATCTC
GTCCTCGTCG ATGCGGAAAC CGTCGCGCAT GCCGTTGCGG CGCGGCCCGT GCGCCAGCTG
GTGGTGGCGA ACGGACGCGT TGTTGCGCGT CACGGAAGGC TGGCCGACAC GCTCTGA
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| Protein sequence | MKDTMLLTDV RMPDGVRVDV AIAEGRIAAI GPDLQVKHEV AREHGNGALL LPGFVEGHTH
LDKTMWGMRW YRNEVGPTLT DRIDNERRFR AQSGHDAAAA SLALAHAFLQ MGTTRLRTHV
DIDTDAGLKH LEGVLTTRDA LGDVLDMQTV AFPQSGMLIR EGTIALLDDA LRAGADVLGA
LDPALIDGDP VASLNATFDL ASRHHKPIDI HLHEPAEIGG FTLKLLLDRV EALGMQGRVV
ISHAFCLGAL APRERDPLLE RLARLDVALL TTAPASVTVP PLAACIEKGV TLFGGNDGIR
DTWNPFGSPD MLERAAQIAM RYDLRRDDAI AVAFDCVSHA AARGCQFTDY GLHVGARADL
VLVDAETVAH AVAARPVRQL VVANGRVVAR HGRLADTL
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