Gene Bphy_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5234 
Symbol 
ID6246724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2358406 
End bp2359221 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID642596960 
Producthypothetical protein 
Protein accessionYP_001861363 
Protein GI186474021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.379746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.233824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC TACTCGAAGA TCGGCCGTCG CTCGTGCTGC GCGACCAGCC CGTGCGCAAG 
TTCTGGTTCG ACGATGAACT GGAACCGCAG CGCTCACTTG CCGAAGAACG TCTGCATCGT
CAACAGCGCC TCGCGGGCGC GTTCCGTCTG TTCGCGCAGT ACGGTTTCGC GCAGGGGCTC
GCCGGCCATA TCACCGCACG CGATCCCGAA TGGACCGATC ACTTCTGGGT CAATCCGCTG
GGCCGGCATT TCGGCCGCAT GCGCGTGTCG GATCTGCTGC TGGTCAATCG CGACGGCGAG
ATCGTCGTCG GCGATGGCCC CGTGAATCAG GCCGCCTTTG CGATTCATGC CGCCATTCAC
GAGGCGCGCC CCGATGTGGT CGCTGCTGCT CATACGCATT CGCTATATGG CAAGACCTGG
TCGACGCTCG GCCGCAAGCT CGATCCGCTG ACACAAGACT CCTGCGCGTT CCACGAAGAC
CACGCGCTGT TCGATGACTT TCGCGGCGTC GTGCTCGACA CCACGGAAGG CGCGCGTATC
GCCCAGGCGC TAGGCTCGCG CAAAGCCGTG ATCCTGAAGA ATCACGGCAT TTTGACGGCA
GGCCCGACAG TCGAAGCGGC CGCATGGTGG TACATCGCGC TCGACAGCGC GTGCCACGCA
CAGCTGCTTG CGGAAGCGGC CGGCACGCCG CAGCCGATTC CCGACGAGAT GGCGACCCTC
ACCCACCAGC AAGTCGGCCG TGCGAACGGC GCGCGTCATG CATTCGACAG CCTGTATGAA
GGGCTGGTCG AAACTGAACG GGAGTTGCTC GACTGA
 
Protein sequence
MITLLEDRPS LVLRDQPVRK FWFDDELEPQ RSLAEERLHR QQRLAGAFRL FAQYGFAQGL 
AGHITARDPE WTDHFWVNPL GRHFGRMRVS DLLLVNRDGE IVVGDGPVNQ AAFAIHAAIH
EARPDVVAAA HTHSLYGKTW STLGRKLDPL TQDSCAFHED HALFDDFRGV VLDTTEGARI
AQALGSRKAV ILKNHGILTA GPTVEAAAWW YIALDSACHA QLLAEAAGTP QPIPDEMATL
THQQVGRANG ARHAFDSLYE GLVETERELL D