| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5095 |
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| Symbol | |
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| ID | 6246589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 2198478 |
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| End bp | 2200199 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642596825 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001861228 |
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| Protein GI | 186473886 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0038503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAAGC CCACCATTGC AGACTACCTT GCAAAAACCC TGGCCGCGGC AGGCGTAAAA
CGAATCTGGG GCGTCACGGG CGATAGCCTC AACGGCCTGG CGTTCAGTCT CGATCAGGTC
GGTTCGATTC GCTGGATGCA TACCCGCCAC GAAGAGGCGG CCGCCTTTGC GGCAGGCGCC
GATGCCGCAT CGAGCGGCCA GCTCGCCGTT TGCGCAGGCA GTTGCGGCCC AGGCAACCTC
CACCTCATCA ACGGTCTCTA CGACTGTCAT CGCAACCAGC AACCCGTGCT GGCCATCGCC
GCCCACATTC CGTCGACGGA AATCGGTCTC GGCTACTTCC AGGAAACCCA TCCCACTGAA
GTCTTCAAGG AATGCAGCCA CTTCGCCGAA CTGGTCGTCA ACGCGTCGCA GTTTCCGCGC
GTGCTCGAAC GCGCGATGCG CACCGCGATC GAGCAGCGCG GCGTTGCCGT GATCGTGCTG
CCCGGCGATA TCGCGCTCGG CGAGGGGCCG TCGCACGCGC CTGTATGGAA TGCCACGATG
CCGTCCGCGA TCCTGCCACC CGATAGCGAA CTCGCGAAAC TCGCGGCCAT GCTCAACGAC
TGCGAAGCCG TGACGATCAT GTGCGGCAGC GGCGTCGCGG GCGCGCACGA CGAAGTGGTG
AAGCTCGCCG ACACGCTCGG TGCGCCCGTC GTGCATGCGC TGCGCGGCAA GCAGTTCATC
GAGTACGACA ATCCGTTCGA CGTCGGCATG ACAGGGCTGA TCGGCTTCAG TTCCGGCTAT
CACGCCATGA TGTCGTGCGA CGTGCTGCTG CTGCTCGGCT GCGACTTTCC GTATAGGCCT
TTCTATCCGC CCGAAGCAAA GGTCGTGCAG ATCGACTGGA AGGGCTCGCA ACTCGGGCGC
CGTGCGCCGC TCGCGCTGGG CCTCGTCGGC ACCGTGAAGG AAACCGTCGC GGCATTGTTG
CCGAAGCTCA AACGCAAGGA TGATCGTACG TTCGTCGACA TGGCCACGGC GCATTACGAA
GAAGCGCGCC GCGATCTCGA CGAACTGGCG ACGCCATCGG ACCCCGGCGC GCCGATTCAT
CCGCAGTATC TGACGCGCAT GATCGACGAG TCCGCCACCG ACGATGCGAT CTTCACGGCC
GACGTGGGCA CGCCGACGCT CTGGGCCGCG CGTTATTTGA CGATGAATGG CAAGCGGCAG
CTGCACGGCT CGTTTAATCA CGGTTCGATG GCGAATGCGA TGCCGCAGGC GCTCGGCGCG
CAAGCGGCGC ATCCGGGCCG GCAGGTCGTG TCGCTGTCGG GCGACGGCGG GCTGTCAATG
CTGCTCGGCG ATCTGCTCAC CGCGCGTCAG CTGAATCTGC CCATCAAGGT CGTCGTGTTC
AACAACAGTC TGCTCGGTTT CGTATCGATG GAGCTGAAAG CGGGTGGCTA TCTCGACACG
AACGTGGACC TGAGCAAGAC GGATTTTGCG CAGATCGCGA AAGGTGCCGG CATTTTCTCG
ATTCGCGTCG AGGAATCGGA AGAACTGGGC GGTGCGCTGA AAAAGGCGTT CGCGCACCAG
GGGCCCGCGC TCGTCGACGT CGTCACCGCG AAGCACGAAC TCGCGATGCC GCCCACTATC
GAGATGTCGC AGGCGAAGGG CTTCAGCCTC TACATGCTGC GCGCGATTCT CAACGGACGC
GGCGACGAAA TCGTCGAACT GGTGAAAACG AATTTGCGCT GA
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| Protein sequence | MAKPTIADYL AKTLAAAGVK RIWGVTGDSL NGLAFSLDQV GSIRWMHTRH EEAAAFAAGA
DAASSGQLAV CAGSCGPGNL HLINGLYDCH RNQQPVLAIA AHIPSTEIGL GYFQETHPTE
VFKECSHFAE LVVNASQFPR VLERAMRTAI EQRGVAVIVL PGDIALGEGP SHAPVWNATM
PSAILPPDSE LAKLAAMLND CEAVTIMCGS GVAGAHDEVV KLADTLGAPV VHALRGKQFI
EYDNPFDVGM TGLIGFSSGY HAMMSCDVLL LLGCDFPYRP FYPPEAKVVQ IDWKGSQLGR
RAPLALGLVG TVKETVAALL PKLKRKDDRT FVDMATAHYE EARRDLDELA TPSDPGAPIH
PQYLTRMIDE SATDDAIFTA DVGTPTLWAA RYLTMNGKRQ LHGSFNHGSM ANAMPQALGA
QAAHPGRQVV SLSGDGGLSM LLGDLLTARQ LNLPIKVVVF NNSLLGFVSM ELKAGGYLDT
NVDLSKTDFA QIAKGAGIFS IRVEESEELG GALKKAFAHQ GPALVDVVTA KHELAMPPTI
EMSQAKGFSL YMLRAILNGR GDEIVELVKT NLR
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