Gene Bphy_5094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5094 
Symbol 
ID6246588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2197682 
End bp2198359 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID642596824 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001861227 
Protein GI186473885 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00443323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGCGC GGCTCATCGT TCAAACGGTG CTGTGGCTTG CGGGTATGGG CGCCGTGCTG 
TTCGGCGCGG CGGGCACGCT CGCGTGGCCG GGCGCGTGGT GCTATCTGTT CGAAATGGGT
GCGTTAGGAC TGTGGGTGGG CGTGTGGCTC GCCGGCTACG ACCCCGGGTT GCTCGCAGAG
CGGCTTGGTT CTTTCGTGCA GCGCGGGCAG AGTACGTGGG ACAAGTTCTT CATGGCGTGC
GTCGCCGTCG CGTGGTGTGC GTGGCTCATT CTAATGGGGC TTGACGCGCG GCGGTTTCAC
TGGTCATCGA TGCACCCATC GCTGCAAGGT GTCGGCGTGC TTGCTATTCT GGTCAGCATG
CTCGCGATGC GCGCTGTGTT TCGCGCGAAT AGCTACGCGG CGCCTGTTGT GAAGATTCAA
TCCGAACGCG GTCATAAGGT GAGTGACAGC GGTCCGTATG CTTACGTAAG GCATCCCATG
TATGCCTGGG CGATCCTTTT TCTCGTGGGC ACGCCGCTGG TGTTGGGCTC ATGGTGGGGC
GCGCTATGCG TGCCGCTGCT GGTTGTCGGG CTCGCCTGGC GGGCTGTGCT TGAGGAGAGG
ATGCTCCGCG AGCAGCTTCC GGGCTACGCC GAGTACGCGG CGCGTGTCCG GTATCGGTTT
GTGCCTTATG TGTGGTGA
 
Protein sequence
MIARLIVQTV LWLAGMGAVL FGAAGTLAWP GAWCYLFEMG ALGLWVGVWL AGYDPGLLAE 
RLGSFVQRGQ STWDKFFMAC VAVAWCAWLI LMGLDARRFH WSSMHPSLQG VGVLAILVSM
LAMRAVFRAN SYAAPVVKIQ SERGHKVSDS GPYAYVRHPM YAWAILFLVG TPLVLGSWWG
ALCVPLLVVG LAWRAVLEER MLREQLPGYA EYAARVRYRF VPYVW