Gene Bphy_5090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5090 
Symbol 
ID6246584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2193766 
End bp2194689 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID642596820 
Producthypothetical protein 
Protein accessionYP_001861223 
Protein GI186473881 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.194809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0140686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTGT CGCCAATATC GCTCAGCAGA AGCCGGCAAG GCGCGCTGAC GCTCGCGAGC 
GGGGGCTTGC TGATGGGCAC GATAGGCGTG TTCGTCGAAG AAGCGCGCCT GAGCGCGTTG
ACGCTGGTGT TTTTCCGTTG CCTGTTCGGC TTTCTTTCGC TGGCCGCGTA TTGCGCGTGG
AAGGGTTATT TCGCGCGCCG TCATTTCACG CGTCGCACGG TGCTGCTCGC CGCAGCTTCG
GGCGTGCTGA TGGTCACGCA GTGGGTCGGT TTCTTCGATG CGATTCATCG CACGAGCATT
GCGGTGGCGA CTGTGGTGTT TCATGTGCAG CCGTTCTGGG TCGTGCTGAT GGGCGCGGCG
CTGTTCAACG AGCGGCTCGG CGCCGACCGG CTCGGCTGGA TCGCGACGGC GTTCGGGGGG
CTCGTGCTCG CGTCGGGGGT CGCGGCGGCG GCTTCGCTGC AGGGTCATGC GAGCTATCTG
ATCGGGATCG GCGAAGCGCT CGCGGGATCC GTGCTGTATG CGAGCGTCAC GCTGATCGCG
AAGAGTCTCG TGGATCTGCG GCCACATCTG CTGACCCTTG CGCAGTGTGC TGTCGGGCTT
GTGTGTTTGC CTTTTATTGC ACCGCTTGGC GCGCAGCATA TCGCGGCTGA TCAGTGGTTC
TGGCTGATCG GCATGGGCGT GTTGCATACC GGGCTTTCGT ATGTGCTGAT CTATGGCGCG
CTGCCCAAGC TAACGACGCC TGTCATCGCC GTGCTGCTCT TTGTCTATCC GCTGACCGCA
ATTGCCGTCG ATGCCATCGT GTACGGGCGT GCTCTTTCAG GCGCGCAAAT GTTTGGAATG
GTGCTTATCG TTGTTGCGAG TCTTGGGGTT AATTTGGGGT GGCCCCTGGT GTCGATGTTT
CGATTTCGGC CTGCCAGGCG GTAA
 
Protein sequence
MFLSPISLSR SRQGALTLAS GGLLMGTIGV FVEEARLSAL TLVFFRCLFG FLSLAAYCAW 
KGYFARRHFT RRTVLLAAAS GVLMVTQWVG FFDAIHRTSI AVATVVFHVQ PFWVVLMGAA
LFNERLGADR LGWIATAFGG LVLASGVAAA ASLQGHASYL IGIGEALAGS VLYASVTLIA
KSLVDLRPHL LTLAQCAVGL VCLPFIAPLG AQHIAADQWF WLIGMGVLHT GLSYVLIYGA
LPKLTTPVIA VLLFVYPLTA IAVDAIVYGR ALSGAQMFGM VLIVVASLGV NLGWPLVSMF
RFRPARR