| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5024 |
|---|
| Symbol | |
|---|
| ID | 6246521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2118959 |
|---|
| End bp | 2120266 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642596753 |
|---|
| Product | chloride channel core |
|---|
| Protein accession | YP_001861160 |
|---|
| Protein GI | 186473818 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.283632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.200334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT CCGCATTTTT CGACCGGCGC GCGATGCTGC GCGCAAGGCG GCTCTGGCTT
CACTATGGCG TGTTCTGGCT GGGGGCGGTG GCAACCGGGC TTGTCGCCGT CCTGTACGCG
CGCCTGATCG ATTTCGGCTA CGACACGTTC CTGCATTGCA CGGTTGCGCA CTGGTGGCTG
CCGCTCGTGC TCACGCCGGC TATCGGTGCA TTCGGGGTCT GGATTACGCG GCGTTGCTTC
CCCGGCGCGG AGGGCAGCGG CATTCCGCAA GTCATCGCGA CGCTGCACGA TGGGCGCGAC
CTGGGGCCGC GTCTGCTGAA CCTGCGCATT CTGGCCGGCA AGATCGCCGT ATCGTTTCTG
TCGATCCTCG GCGGCTTCAC GATTGGCCGG GAAGGGCCGA CGATCCACGT GGGTGCGTCG
CTGATGTTCA GTCTGCGGCG CTTCTATCCG GCGCGTTTGC GTAACCTGCG AGGTGGGGAA
CTCGAGCGCA AGCTCGCGTT GGCGGGCGCC GCCGCGGGGC TCTCCGCGGC GTTCAATGCG
CCGCTTGCCG GCGTCGTGTT CGCGATCGAA GAACTGACGC GCAGCTTCGA GCAGCGAACC
AGCGGTGTGC TGATCACGGC GATTATCTTC GCGGGCGTTG TCTCTCTCGG CTTGCAGGGC
AACTACACGT ATTTCGGCAC GATCGAAATC GACGGCCACT TTCCGGATCT GCTGGCCGTT
GCCGCCGTGC TGCTGGGCGT CGTGACGGGC GTGGCGGGCG GCGCGTTCTG CTGGCTGCTG
CTCAATACCG AACGCTGGAT GCCCGCTGGG CTCGTCACGT GGAGAAAGGC GCATCCCGTT
GCGTTCGGCG CGGCGTGCGG CCTGTTCATC GCCGTGATCG GCGTGGCCGC CGGCGCGCAC
ACGTTCGGCA GCGGCTATGC CGAAGCGCGC GGCATGCTAG AAGGCAGTTC GCAACTCGGT
GCGAGCTATC CGCTGCTGAA GATGGCATCG ATGGTCGGTT CGTATTTGCC CGGCGCGCCG
GGCGGTCTCT TTGCGCCTTC CCTCGCGATC GGCGCGGGAA TCGGCAACGC ACTGCATCTC
GTGTTCGGGC AGATGCAGCT TCCGATGCTG ATCGCGCTCG GCATGGTCGG CTATCTCGCT
GCCGTCACAC AAAGCCCCAT CACCGCATTT GTGATCGTGA TCGAGATGAT CAACGGGCAT
GCACTGGTGC TTTCGCTAAT GGCGACGGCG CTAATATCGA GCCAGGTGTC GAAACTGTTT
GCGCCGCCGC TTTACGAGGC GCTGGCGCAG CGCTATGCCG CCCGTTGA
|
|---|
| Protein sequence | MRISAFFDRR AMLRARRLWL HYGVFWLGAV ATGLVAVLYA RLIDFGYDTF LHCTVAHWWL
PLVLTPAIGA FGVWITRRCF PGAEGSGIPQ VIATLHDGRD LGPRLLNLRI LAGKIAVSFL
SILGGFTIGR EGPTIHVGAS LMFSLRRFYP ARLRNLRGGE LERKLALAGA AAGLSAAFNA
PLAGVVFAIE ELTRSFEQRT SGVLITAIIF AGVVSLGLQG NYTYFGTIEI DGHFPDLLAV
AAVLLGVVTG VAGGAFCWLL LNTERWMPAG LVTWRKAHPV AFGAACGLFI AVIGVAAGAH
TFGSGYAEAR GMLEGSSQLG ASYPLLKMAS MVGSYLPGAP GGLFAPSLAI GAGIGNALHL
VFGQMQLPML IALGMVGYLA AVTQSPITAF VIVIEMINGH ALVLSLMATA LISSQVSKLF
APPLYEALAQ RYAAR
|
|---|
| |