| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5018 |
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| Symbol | |
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| ID | 6246515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2114579 |
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| End bp | 2115127 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642596747 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001861154 |
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| Protein GI | 186473812 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.215655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCAAG ACGCGGAAAG CCGCCTGAAA GCATTGTTCG TCAGTGGTCT CGACGGCGAC
GCCGACGCTT ATCGAGGCTT TCTCCAGGCA CTCACGCGAC ATTTGCGCGG CTTTTTGCGC
AGACGCATCC CGCAGTATCG CGACGATGTC GAAGACCTGG TTCAGGAGAT TCTGCTCGCC
GTGCACAATG CGCGGCACAC CTATCGTCCC GACGAGCCGC TGACGGCCTG GCTGCATGCG
ATCGCCCGCT ACAAGCTGAT GGATTTCTTC CGTTCGCGTG CGCGTCGCGA ATCCCTCAAC
GATCCGCTCG ACGATCACGC CGATCTGCTC GCCGACACCG ACGACGAACC CGCGCAAGCG
CGTCACGATA TTGGCAAGCT GCTCGACCAT CTTCCCGACA AGCAGCGGCT CCCGATCGTC
CACATGAAAC TCGAAGGCCT GTCTGTCACG GAGACGGCGC GTATCACGGG TCTGTCCGAA
TCGGCCGTGA AGGTCGGCGT GCATCGGGGG CTCAAGGCGC TGGCCGCACG CATCCGGGGG
CTACGATGA
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| Protein sequence | MLQDAESRLK ALFVSGLDGD ADAYRGFLQA LTRHLRGFLR RRIPQYRDDV EDLVQEILLA
VHNARHTYRP DEPLTAWLHA IARYKLMDFF RSRARRESLN DPLDDHADLL ADTDDEPAQA
RHDIGKLLDH LPDKQRLPIV HMKLEGLSVT ETARITGLSE SAVKVGVHRG LKALAARIRG
LR
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