| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4967 |
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| Symbol | |
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| ID | 6247105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 2053104 |
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| End bp | 2054591 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642596696 |
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| Product | integrase family protein |
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| Protein accession | YP_001861103 |
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| Protein GI | 186473761 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.617968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCTG CCGACTGGAT CGACGTGCTC GCTGTTCCGC CCCGACCGTT GCCGGCCGGT
ATCGACGACG CCGTGCGCTA CCTGTCCGAC GCACTGAACG TCCCCGTCTA CGAACGCTGG
ACGCCCGCCT CCCTGCTCAG GAAGTACGGA TGCATGCAGG ACGCGAGAGC TGGGCAACCC
GAGGTCTATG CCCTGCTGCT GGCCGGCGGC CCCGTGGTGC AGTTCTGGGA TGCGGGGCGG
GTGCTGACCG TGCCCGCCGG GCGGGCTCCG CGCAGTGAGG TGGTCGTCGA GCGCCTGCTG
CGCGTCCTGC GGGTTCGCTT TCGCTGCGTC AAGCCCCGCG CGCCGCAATG TGACCCTGAG
CCCGTCGCCG GTCCGGCCCC GCACACGCGC GCAAAGGCCC TGGCCTCGCT TGACGGCGAA
CCGTGGCTCG CCGGCGCGGG ACCTCTCGTT AATCTGGACC CGGCCTCGAA CACCCTGGGC
ACCTTCGATG ATGCGTCGGC GATCCGGCTT TTCCTGCGCG ACCGGGCAGG TGCGTCCGTG
CACACGAGAC GCGGCTATAT CGCGGAAATC CGGCGCCTGG TCAGGTGGTG CCAGGCAAAC
GATATTGCGG GCCCGCTGTC CGGGCTGTCG CGCGAGCACC TCGTCCGGTA CCGGGATGAC
CTGTCCAACA TGGGCGCACG CACCCCGCGC GCATCGCAAG TGCTCGGCGA ACGCAGCCAG
AAACGTGCAC TCGCGGTCGT GCGCAGCGTC CTGAGTTATC TGTGGAGGAC CGGTTACCTG
ACGGCGAACC CGGGCGCCGG TCTGGGCGAC ACGGCAGCCG CACGCGAAAA GTTCGCCCCC
GATCGCATCC TCCCTGCCGG CGCCGTACAC GCATGCGACA GCTGGTTGCG CGCCCGCCTG
AACCCCGAAG GCCGGCCGAT CGCCGTCATG CGACGCGCGG CCATCGTCGC GACCTACCGC
TTTACCGGCA TCCGCCTGGA TGAACTGGCC TGGCACGACG GCTATCCCCG GGTGGTGACC
GGCGACGATG GCTGGACGCT ACAGGTCAGG GGGAAGGGGC GCCGGGAGCG GGCGGTGCCG
CTCCCCGGTC CGTGCGTGAT CTTTCTGCAG CAATATCGAC AGGCGTGCGG ACTGCCGCCT
ACCCCGCCCC CCCGGGAAAA CCTGCCGCTC ATCCGCGGAC AGCGGCATGA CGCGCTCGGC
CCTTCGGGAC TGTATCGCGA AGTCCGGGCG GCGTTTGCGG AAATGGCCGC CGCCGTGCCA
CCTACCGAGG CGACCACACG CCTGGCACTC CAGGAAGCAT CGCCACACTG GCTGCGCCAT
CTGGTCGGCA AGACGCTCGT CGTCGATGCC AACGTTCCCC TGCCCGTCGC CCAGATGCTG
CTCGGGCATC AGTCGGTGGC AACGACGGCC GGTTACGCCC GTGCCGATGC ATCACAGCTT
CGTCACGTGA TGCAGCGCTG CTTTACGCTG ACGTCCGATG CAGGATGA
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| Protein sequence | MSPADWIDVL AVPPRPLPAG IDDAVRYLSD ALNVPVYERW TPASLLRKYG CMQDARAGQP
EVYALLLAGG PVVQFWDAGR VLTVPAGRAP RSEVVVERLL RVLRVRFRCV KPRAPQCDPE
PVAGPAPHTR AKALASLDGE PWLAGAGPLV NLDPASNTLG TFDDASAIRL FLRDRAGASV
HTRRGYIAEI RRLVRWCQAN DIAGPLSGLS REHLVRYRDD LSNMGARTPR ASQVLGERSQ
KRALAVVRSV LSYLWRTGYL TANPGAGLGD TAAAREKFAP DRILPAGAVH ACDSWLRARL
NPEGRPIAVM RRAAIVATYR FTGIRLDELA WHDGYPRVVT GDDGWTLQVR GKGRRERAVP
LPGPCVIFLQ QYRQACGLPP TPPPRENLPL IRGQRHDALG PSGLYREVRA AFAEMAAAVP
PTEATTRLAL QEASPHWLRH LVGKTLVVDA NVPLPVAQML LGHQSVATTA GYARADASQL
RHVMQRCFTL TSDAG
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