| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4908 |
|---|
| Symbol | |
|---|
| ID | 6246416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1988520 |
|---|
| End bp | 1989179 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642596648 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001861055 |
|---|
| Protein GI | 186473713 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.172964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGA ATCAAGTTGA TCGAGAATGC GTTGGCCGGG CTTTTAGTCC AGAAGGCATG
ATCGAAGCTC GCAACAGAAC GTGGGAAGGA ATTGAGGCGA TAGCAGAAGC CATGCAACCG
GGCATGACGG AGCCTGAAGC CACACATGCG GCAAGGAAGG TACTGAAGAG TTTGGGCCTG
CTCCAGGGGT GGCACGCGAT CTGTATTCGC TTCGGCTGCA ACACGATGCT TGAGTACGGC
GCGCCGTCGA CCCCAAGCGT GACTCTGGCT ACCCAAGACA TCATTACTAT CGATATCGGT
CCGCTCTGGA AGGGATGGGA AGCCGATGCG GGTGCTACCT TTGTCGTCGG TGACGACCCT
GAAATGCTAC GTGCAAAACA TGACGTGAAG CTGTTGTGGG ATCGCGTTCG GGATGCCTGG
GCGACTCGGA CTCTAACCGG AACAGATCTC TACGATTTCG CTGCTCAAGA GGCGGACAAG
CTCGGATGGA TCTTTGATCC CATCATGGCG GGCCATCGCG TTGGCGACTT CCCTCACCGA
TACAACGGCT CGTTGCGTCA GATGGACGCG TCGCCTAGTC CATACATCTG GATCCTCGAA
ATCCTCATCA GGCACAAAAG TAGGCAATTC GGTGCCTACT TCGAAGACCT GCTTACATAA
|
|---|
| Protein sequence | MDQNQVDREC VGRAFSPEGM IEARNRTWEG IEAIAEAMQP GMTEPEATHA ARKVLKSLGL
LQGWHAICIR FGCNTMLEYG APSTPSVTLA TQDIITIDIG PLWKGWEADA GATFVVGDDP
EMLRAKHDVK LLWDRVRDAW ATRTLTGTDL YDFAAQEADK LGWIFDPIMA GHRVGDFPHR
YNGSLRQMDA SPSPYIWILE ILIRHKSRQF GAYFEDLLT
|
|---|
| |