Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4680 |
Symbol | |
ID | 6246197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1746853 |
End bp | 1748538 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642596429 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001860836 |
Protein GI | 186473494 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.840786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.137791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCT TCGCCACGCT CTACACGGCA CTCGACGCGA CCACGTCGAC ACGCGACAAG CTCGACGCGC TGATCACCTA CTTCCATGCC GCGCCGCCCG AAGACGCGGC ATGGGCGTCG TATTTCCTGG CGGGCGGCAA GCCTCGCCAG TCGGTGCCGA CGCGCCTGCT CACCGAGATC GCGCGTACGC ACGCGGGTTT GCCGGAGTGG CTGTTCGAAG AGTCGTATCA GGCCGTCGGC GATCTCGCGG AGACCATTGC GCATGTGTTG CCGCCTGCTG CTCGCACGTC CGAACTGGGG CTCACGCAAT GGATCGAAGA ACGCATCCTG ACACTGCGCG GTGCTTCGCC GGAAACACTG CGTGAGCGTC TCGTCGCGTA CTGGAACGAA CTCGACTGGA GCGGCCGCTT CCTTTTCACG AAGCTGATCG GCGGGGGCTT TCGGGTAGGT GTCGCGCGGC AGCTCGTCGT GCGCGCGCTC GCCGACGTCG CGGGCGTCGA TCACAAGCTG ATCGCACAGC GCATGGTCGG CTGGACGGAT TCGAGCCAGC CGCCCGACGC CGCGCGCTAT CTGCGTCTCA TCGCGCCCGC CCCTTCGGAC GATGCAAACG GCGACGCCGA AGCCGCGCTT GTGCGTCACG AAAGCGAGCG CGGCCTGCCC TTCCCGTTCT TTCTCGCACA TCCGCTGCAA TCCGATCCCG CGACACTCGG CGATCCGTCA TCGTGGTTCG CCGAATGGAA GTGGGACGGC ATACGCGCGC AAGTCGTGAA ACGCGATGGC CGCGTGTGGG TGTGGTCGCG CGGCGAAGAT CTGATCACGG ACCGCTTTCC CGAAGTCGTC GCGTTGGGCG AAGCGCTGCC GGACGGTCAT GTGCTCGACG GCGAGATTCT CGCATGGGAA CCCGACGCGC TCGCGCCGCT GCCCTTCGCG AGGCTGCAAC CGCGCATCAC GCGCAAGTCG CTGACGAAGC GCGTGCTCGC CGAATCGCCC GCCACGTTCC TCGCCTACGA CCTGCTGGAA TCGCGCGGCG AGGACTTGCG CATGCGGCCG CTGCACGAAC GGCGCGCGCG GCTCGACACG CTGGGCGTAA CGCTCGCCGA TACCCTCGCG AAAGATCTGC TGCGTGTGTC GCCCCTCGTC GATGCACACG ACTGGCACGC GCTTGCCGCA TTGCGCGACG AAAGCCGCGC ACGCGGCGTC GAAGGATTGA TGCTCAAGGA GCGCGCGTCG ATGTACGGCG TCGGCCGCAC CAAGGCGGCG GGCACATGGT GGAAATGGAA GATCGACCCC TATGCGATCG ACGCCGTGCT GATCTACGCG CAACGCGGCC ACGGGCGGCG CGCGAGCCTC TACACCGATT TCACGTTCGC CGTCTGGGAC GAAGCGGACG GCGTGCGTAC GCTCGTGCCC TTCGCGAAGG CCTACTCGGG CCTGACAGAT GATGAGATGC GCGAAGTCGA TGCGATCGTG CGCAGGACGA CCGTCGAAAA ATTCGGCCCG GTGCGCAGCG TCACACCGAC GCTCGTGTTC GAGATCGGCT TCGAAGGCAT TCAGGCGAGC CCGCGTCACA AGTCCGGCGT GGCCGTGCGC TTTCCGCGCA TGCTGCGCTG GCGCACCGAC AAGCATATCG ACGACGCCGA CACACTCGCG ACGCTCAAGG GCTTCATCGA CGAACGCGCA CGCTGA
|
Protein sequence | MKRFATLYTA LDATTSTRDK LDALITYFHA APPEDAAWAS YFLAGGKPRQ SVPTRLLTEI ARTHAGLPEW LFEESYQAVG DLAETIAHVL PPAARTSELG LTQWIEERIL TLRGASPETL RERLVAYWNE LDWSGRFLFT KLIGGGFRVG VARQLVVRAL ADVAGVDHKL IAQRMVGWTD SSQPPDAARY LRLIAPAPSD DANGDAEAAL VRHESERGLP FPFFLAHPLQ SDPATLGDPS SWFAEWKWDG IRAQVVKRDG RVWVWSRGED LITDRFPEVV ALGEALPDGH VLDGEILAWE PDALAPLPFA RLQPRITRKS LTKRVLAESP ATFLAYDLLE SRGEDLRMRP LHERRARLDT LGVTLADTLA KDLLRVSPLV DAHDWHALAA LRDESRARGV EGLMLKERAS MYGVGRTKAA GTWWKWKIDP YAIDAVLIYA QRGHGRRASL YTDFTFAVWD EADGVRTLVP FAKAYSGLTD DEMREVDAIV RRTTVEKFGP VRSVTPTLVF EIGFEGIQAS PRHKSGVAVR FPRMLRWRTD KHIDDADTLA TLKGFIDERA R
|
| |