| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4610 |
|---|
| Symbol | |
|---|
| ID | 6246127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1674143 |
|---|
| End bp | 1675387 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642596359 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_001860766 |
|---|
| Protein GI | 186473424 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0920058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.113681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACGAAG ACTTCCCCCG CATCGATCCC ATTCGCCTGC TTGACGATCT CAAGACCTTG
CGCAGCTTCG GCGCGACCGG GCCCGGCGTG GTGCGCCTAT CGCTCTCGCC GGTCGATATC
GACGCGCGCC GCTGGCTCGC GGGGCGCATG ACGGACGCAG GGCTGGACGC GGCCATCGAT
GGCGTCGGCA CCGTGTTCGG TCGTTCACGC AAGCCCGGCC CTGCGCTCGT GATCGGCTCG
CACAGCGACA CGCAGCCGAC GGGCGGCTGG CTCGACGGCG CGCTCGGCGT GATCTATGGA
CTCGAAATCG CACGCGCTCT TGGCGAATGC GAGGCCACGC GCGAGTTCGC GGTGGACGTT
GCATCATGGA TCGACGAAGA GGGGACGTTT TCGAGCTTCC TCGGCAGCCG CAGCTTCGTC
GGGGACGCGA TCGACGATTC GTTACGAAGC GCGCGCAATC ACGAAGGTCT CTTGCTCGGC
GATGCGCTTG CTCAGGCGGG CCTCGCGAAT ACGCCACGCG TGACCCTCGA TCGCAAGAGG
CAACGTGCGT ATCTCGAACC GCATATCGAG CAGGGCGGAC GGCTCGAGGC GTCGGCGAAA
TTGATCGGCG TGGTGACGAC GATCGTCGGC ATTCGCGAGT TTCAGCTGCG CTTCATCGGG
CAGCGCAATC ACGCGGGTAC GACGCCGATG GCGATACGGC GCGATGCGGG GGCGGCGCTG
GTCGCGTTCA TCGCGCATAT CGACGATGCG TTCGGCCGGC TCGCGGATGC AGATACGGTG
TGGACGGTCG GGCGCATCGA TCTCGATCCG GGTTCCTTCA GCGTCGTGCC AGGCAAAGCC
GTGCTGCACC TGCAGTTCCG CGACGCAAAC CCCAACCGGC TGCATGCGAT GGAAAACGCG
CTCGTTGCGC TGGTCGACGA ATGGAACGGA CAACATCTCG TCCGCGCGGA GTTGATCGCG
TGCGAAGGCG CCGAAGAACC CGTCACGATG GATGCGGCCC TGCAGCAGCA TCTCGCACAG
GCCGCCGACG CGCTCGCCCC CGGACAATGG ATGCATATGC CGAGCGGCGC GTCGCACGAT
GCACAGGTGA TCGCGCAGCA TATTCCAGCT TGCATGCTGT TCGTGCCGAG CATCGGAGGC
GTCAGTCACG ATTTCATCGA AGACACGGCG GAGCAGCATA TCGTGCTCGG GTGCGAGGTG
GCAGCGCGAG CGGCCGCGCG CATTGCTGGG GCGCTGAGGC GCTGA
|
|---|
| Protein sequence | MHEDFPRIDP IRLLDDLKTL RSFGATGPGV VRLSLSPVDI DARRWLAGRM TDAGLDAAID
GVGTVFGRSR KPGPALVIGS HSDTQPTGGW LDGALGVIYG LEIARALGEC EATREFAVDV
ASWIDEEGTF SSFLGSRSFV GDAIDDSLRS ARNHEGLLLG DALAQAGLAN TPRVTLDRKR
QRAYLEPHIE QGGRLEASAK LIGVVTTIVG IREFQLRFIG QRNHAGTTPM AIRRDAGAAL
VAFIAHIDDA FGRLADADTV WTVGRIDLDP GSFSVVPGKA VLHLQFRDAN PNRLHAMENA
LVALVDEWNG QHLVRAELIA CEGAEEPVTM DAALQQHLAQ AADALAPGQW MHMPSGASHD
AQVIAQHIPA CMLFVPSIGG VSHDFIEDTA EQHIVLGCEV AARAAARIAG ALRR
|
|---|
| |