| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4500 |
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| Symbol | |
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| ID | 6246020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1545711 |
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| End bp | 1547228 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642596252 |
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| Product | outer membrane porin |
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| Protein accession | YP_001860659 |
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| Protein GI | 186473317 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.697186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.197989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCC AACGATCAAC ATCAGGAGCA TCGAAATTCG CGTTACTGGC CGTGAGCCTG
CCCGCGCTGA CGATTGCAAC CCCCGCGTTC GCGGACGACA CAGCCGCACC CGCCGCAGCC
GCGAGCGCGG CGGTGGCACA GGCAGCACCC GCATCGCCTG CGACACCCGT CTCGCCAGCC
AAGCCGAAGC TTAAACACAC GCCGAACACC ACGGAAGTGC AGCCTGAAAC CAACAACGCG
CTTGTGAATG CAGAAGCCGA ACAGGCCGTG ACCCCGCCCG AGCAGTTGTC GAGCCAGGCG
AAGAGCAAAG GTCTGATCGC CGACAGCCAT CTGAACCTGC TGTTCCGCAA TTACGCCGAT
GTGTTCGATA ACGAAGGCGG GCCGCATCGT CATGCGTGGG TGCAGGGCAT GCAGGCAAAT
TTCGAATCGG GCTATACGCA AGGGCTCGTC GGTCTCGGCT TCGATGCGTC GCTGTTCGCC
GCGCTCAAGC TGGACGGCGG CAACGGCGCG GGCAACATGG TGCACGTCGC GAAAGGCGGC
GGCGGCTCCG ATCAGCTCGC GTGGGCGTAT CCGGGCATGT ACGACATCAA GGCGCGCATC
TCCGAAACAG TCGTCAAATA CGGTTTGCAG ACGGTCGATA ACAACCCGTT CATGGAACCG
CACGACAACC GCTCGTTGCC GCCGACCTTC CTCGGCGTGT CGGCCGTCAG CAACGACATC
CACAACGTCA CGCTTGAAGC AGGCAGCTTT TCAAAAGTCA ACGCGCGCGG CCACACGTAC
CTGACCGACC TGACGTCGTC TTACGGCGGC GTGACGATCA AGCGCTTGTC CTACTTCGGC
GGCAACTGGG ACTATTCGCC CAACGGCACC GTCACGCTGT ACGCCGATCA GGCTGAAGAC
GTGTGGAACC AGTTCTACGC CGCAGTCTCT CATTCGATTG GCGATGTGAA CACCGTCAAG
TGGGCCGGCC TCGCGAACAT CTACTCGACG CACCAGACGG GTTCCGCGCT GCAAGGGCAT
ATCAACAACA ATGCGTATAG CCTGTCGCTG TCGGCGCAAC ATGGTCCGCA TCAGGTGCTG
CTCGGTTATC AGCAGATTCT CGGCGACCAG TTCTTCGATT ATGTGAACGA GACCAACGGC
ATCTATCTCG TGAACTCGAT GGACGTCGAC TACAACGCGC CGCACGAAAA GTCGTTCCAG
CTGCGTTATA CGTTCGACGG CAAGTATGCC GGTCTGCCCG GCTTCAAGGC GATGCTGTGG
GGCGTGACGG GCTGGGGTGC GGACGCTTCG GCGGGCGCAG CGTCGGGTGC AATCGGACCG
TACACGCGAA ACGGCGAGTA TGTCCACGGC ACGCACCACG AAATCGGCTT TATTCCGAGC
TATACGCTGC AAAGCGGCCG CTTCAAGGAT ACGAAGATCA CGTTCATCGC GATGTATCAC
AAGTCGACGG CGCACTACTC GGACCCGGAC AACATGGAGT ACCGTCTGGT CGTGAATGTG
CCGGTGAAGG TGTTCTAA
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| Protein sequence | MTTQRSTSGA SKFALLAVSL PALTIATPAF ADDTAAPAAA ASAAVAQAAP ASPATPVSPA
KPKLKHTPNT TEVQPETNNA LVNAEAEQAV TPPEQLSSQA KSKGLIADSH LNLLFRNYAD
VFDNEGGPHR HAWVQGMQAN FESGYTQGLV GLGFDASLFA ALKLDGGNGA GNMVHVAKGG
GGSDQLAWAY PGMYDIKARI SETVVKYGLQ TVDNNPFMEP HDNRSLPPTF LGVSAVSNDI
HNVTLEAGSF SKVNARGHTY LTDLTSSYGG VTIKRLSYFG GNWDYSPNGT VTLYADQAED
VWNQFYAAVS HSIGDVNTVK WAGLANIYST HQTGSALQGH INNNAYSLSL SAQHGPHQVL
LGYQQILGDQ FFDYVNETNG IYLVNSMDVD YNAPHEKSFQ LRYTFDGKYA GLPGFKAMLW
GVTGWGADAS AGAASGAIGP YTRNGEYVHG THHEIGFIPS YTLQSGRFKD TKITFIAMYH
KSTAHYSDPD NMEYRLVVNV PVKVF
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