Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4465 |
Symbol | |
ID | 6245986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1505990 |
End bp | 1507210 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642596218 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001860625 |
Protein GI | 186473283 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.662069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.481724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGC GCGCAGCATG GACTTCCCGC ATTGCCGCTA CGCTGGCCGT TTCCCTCGGT GTGTCGCTCG CGGCGCCCGG CGCATCCGCG CAGCAGACCA TCAAGATCGG CGAAATCAAT AGCTACAAGG CGCAGCCCGC TTTTCTCATG CCTTACAAGA ACGGCTGGAA TCTCGCGCTG GATCAGGTGA ACGCGACGGG CGGCGTGCTG GGCAAGAAGC TCGAAGTGGT CTCACGCGAC GATAACGCGA ACCCGGGCGA CACGATTCGC GTCGCGCAGG AGCTGATCGC GCGCGAGCAG GTGCAACTGC TGTTCGGCGG CTATCTGTCG AATACAGGCC TCGCACTGAC GGACTTCGCG AAGCAGAAGC GCATCTTCTT CCTCGCCGCC GAGCCGCTCA CCGACAAGAT CGTGTGGGCC GACGGCAACA AGTACACGTA CCGTTTGCGC CCTTCCACCT ACATGCAGGT CGCGATGCTC GTGCCCGAAG CGGCGAAGCT GAAGAAAAAG CGCTGGGCGC TCGTATATCC CAACTATGAA TACGGACAGT CGGCTGCCGC GACGTTCAAG AAGCTGCTGA AGGCCGCGCA GCCCGACGTC GAGTTCGTCA CCGAGCAGGC GACGCCGCTC GGCAACCTCG ACGCCGGCGC GACCGTGCAG GCGCTCGCCG ACGCGAAGCC CGACGCGATC TTCAACGTGT TGTTCAGCGC GGACCTCGGC AAGTTCGTTC GCGAAGGGAA TACGCGTGGC CTCTTCAAGG ATCGCAGCGT GGTCTCGCTG CTGACGGGCG AGCCCGACTA TCTCGACACG CTCGGCGCGG AAGCGCCCGT CGGCTGGATC GTGACGGGCT ACCCGTGGTA TTCCGTCGAG ACGCCCGCGA ACAGGAAGTT TGTCGCGGAC TATCAGGCGA AGTATCACGA CTATCCGCGC CTCGGCTCGG TGGTCGGCTA TACGGCGCTG ATGTCGATCG CGAATGGCAT CAAAAAGGCC GGTTCGACCG ATCCCGACAA GCTCGCGGCC GCGTTCAAGG GCTTGAATGT CGATACGCCG TTCGGGCCGA TCATGTATCG CCCGCAGGAC AATCAGTCGA CGATGGGCGC GTTCGTCGGC GTGACGGCAC TGAAAGACGG CAAGGGTGTG ATGACGTCGT ATCGCTATAT CGACGGCGCG AGCGTGCAGC CGTCCGACGC CGAAGTGAAG AAGCTGCGTC CCGCAGAGTA A
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Protein sequence | MTSRAAWTSR IAATLAVSLG VSLAAPGASA QQTIKIGEIN SYKAQPAFLM PYKNGWNLAL DQVNATGGVL GKKLEVVSRD DNANPGDTIR VAQELIAREQ VQLLFGGYLS NTGLALTDFA KQKRIFFLAA EPLTDKIVWA DGNKYTYRLR PSTYMQVAML VPEAAKLKKK RWALVYPNYE YGQSAAATFK KLLKAAQPDV EFVTEQATPL GNLDAGATVQ ALADAKPDAI FNVLFSADLG KFVREGNTRG LFKDRSVVSL LTGEPDYLDT LGAEAPVGWI VTGYPWYSVE TPANRKFVAD YQAKYHDYPR LGSVVGYTAL MSIANGIKKA GSTDPDKLAA AFKGLNVDTP FGPIMYRPQD NQSTMGAFVG VTALKDGKGV MTSYRYIDGA SVQPSDAEVK KLRPAE
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