Gene Bphy_4465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4465 
Symbol 
ID6245986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1505990 
End bp1507210 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID642596218 
Productextracellular ligand-binding receptor 
Protein accessionYP_001860625 
Protein GI186473283 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.662069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.481724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC GCGCAGCATG GACTTCCCGC ATTGCCGCTA CGCTGGCCGT TTCCCTCGGT 
GTGTCGCTCG CGGCGCCCGG CGCATCCGCG CAGCAGACCA TCAAGATCGG CGAAATCAAT
AGCTACAAGG CGCAGCCCGC TTTTCTCATG CCTTACAAGA ACGGCTGGAA TCTCGCGCTG
GATCAGGTGA ACGCGACGGG CGGCGTGCTG GGCAAGAAGC TCGAAGTGGT CTCACGCGAC
GATAACGCGA ACCCGGGCGA CACGATTCGC GTCGCGCAGG AGCTGATCGC GCGCGAGCAG
GTGCAACTGC TGTTCGGCGG CTATCTGTCG AATACAGGCC TCGCACTGAC GGACTTCGCG
AAGCAGAAGC GCATCTTCTT CCTCGCCGCC GAGCCGCTCA CCGACAAGAT CGTGTGGGCC
GACGGCAACA AGTACACGTA CCGTTTGCGC CCTTCCACCT ACATGCAGGT CGCGATGCTC
GTGCCCGAAG CGGCGAAGCT GAAGAAAAAG CGCTGGGCGC TCGTATATCC CAACTATGAA
TACGGACAGT CGGCTGCCGC GACGTTCAAG AAGCTGCTGA AGGCCGCGCA GCCCGACGTC
GAGTTCGTCA CCGAGCAGGC GACGCCGCTC GGCAACCTCG ACGCCGGCGC GACCGTGCAG
GCGCTCGCCG ACGCGAAGCC CGACGCGATC TTCAACGTGT TGTTCAGCGC GGACCTCGGC
AAGTTCGTTC GCGAAGGGAA TACGCGTGGC CTCTTCAAGG ATCGCAGCGT GGTCTCGCTG
CTGACGGGCG AGCCCGACTA TCTCGACACG CTCGGCGCGG AAGCGCCCGT CGGCTGGATC
GTGACGGGCT ACCCGTGGTA TTCCGTCGAG ACGCCCGCGA ACAGGAAGTT TGTCGCGGAC
TATCAGGCGA AGTATCACGA CTATCCGCGC CTCGGCTCGG TGGTCGGCTA TACGGCGCTG
ATGTCGATCG CGAATGGCAT CAAAAAGGCC GGTTCGACCG ATCCCGACAA GCTCGCGGCC
GCGTTCAAGG GCTTGAATGT CGATACGCCG TTCGGGCCGA TCATGTATCG CCCGCAGGAC
AATCAGTCGA CGATGGGCGC GTTCGTCGGC GTGACGGCAC TGAAAGACGG CAAGGGTGTG
ATGACGTCGT ATCGCTATAT CGACGGCGCG AGCGTGCAGC CGTCCGACGC CGAAGTGAAG
AAGCTGCGTC CCGCAGAGTA A
 
Protein sequence
MTSRAAWTSR IAATLAVSLG VSLAAPGASA QQTIKIGEIN SYKAQPAFLM PYKNGWNLAL 
DQVNATGGVL GKKLEVVSRD DNANPGDTIR VAQELIAREQ VQLLFGGYLS NTGLALTDFA
KQKRIFFLAA EPLTDKIVWA DGNKYTYRLR PSTYMQVAML VPEAAKLKKK RWALVYPNYE
YGQSAAATFK KLLKAAQPDV EFVTEQATPL GNLDAGATVQ ALADAKPDAI FNVLFSADLG
KFVREGNTRG LFKDRSVVSL LTGEPDYLDT LGAEAPVGWI VTGYPWYSVE TPANRKFVAD
YQAKYHDYPR LGSVVGYTAL MSIANGIKKA GSTDPDKLAA AFKGLNVDTP FGPIMYRPQD
NQSTMGAFVG VTALKDGKGV MTSYRYIDGA SVQPSDAEVK KLRPAE