| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4279 |
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| Symbol | |
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| ID | 6245806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1283005 |
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| End bp | 1284465 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642596038 |
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| Product | PAS modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001860445 |
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| Protein GI | 186473103 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG ACTGGTCGGG CTTGCCCGCG ACCTACAGCG ACGTCCTGCG CCGCGCGATG
GACTCGCTTT TCCGCACTTT CGAAAACTTC AGCGAAGGCA CATTCATCGT CGATGCGGAT
GCGCGCGTCG TGTGGATCAA CAAGCGCTAC GCCGCTCGCT TCGGCTTCTC CGATCCGCAA
CAGGCGATCG GCCGCGACTG CGAAGCGGTG ATCCCGAATA GCCTGATGCG CGAAGTCGTG
ATGACGGGCA AGCCGATCCT CCTCGACGTT CTCGAAACGG ATCGGGAGCC GCTCGTCGTC
ACGCGGCTGC CGTTGAAGGA CGATGCAGGC AAGACAGTCG GCGCTGTCGG CTTCGCGCTG
TTCGACGAGA TGAAGGCGCT CACGCCGCTT TTTTCTCACT ACTCGCGCGT GCAGCAGGAA
TTGATCGCGA CGCGCCAGTC GCTGGCTCAG GCGCGTCGCG CGAAGTACAC GTTCGCGAGC
TTCGTCGGCA CGAGCGCCGC GAGTCTCGAA GTGAAGCGCC AGGCGCGGCG TGCATCGCAA
GTCGATTCGC CCGTGCTGCT GCTCGGCGAA ACGGGCACCG GGAAAGAACT GCTCGCGCAT
GCGATTCACG GTGCATCGTC GCGCTCGACC AAGCCACTCG TCACCGTCAA CGTTGCCGCG
ATCCCCGACG CGTTGCTCGA AGTCGAATTC TTCGGCGCGG CGGCGGGCGC CTATACGGGC
GCGGACCGCA AGGGCCGCGT CGGCAAGTTC GAACTCGCCG ACGGCGGCAC GCTCTTTCTG
GACGAGATCG GCGATATGCC GCTGCCGCTG CAAGGCAAGC TGCTGCGCGT GTTGCAGGAC
CGCGAGTTCG AGCCGCTCGG GTCGAACCGC ATCGTGCGCG CCGACGTGCG GATCATTGCG
GCGACTTCGG CGGATTTGCC CGCGCTTGTC GCCGAGGGGC GCTTTCGCCC GGACCTGTTC
TATCGTCTCA ACGTGCTGAC CATTCATGCG CCGCCGCTGC GCGAGCGCCA AACGGATATC
GAGGCGCTCG CTTATACGAT TCTCGAAGAT CTGTCGACGC AGGTGCGCGG CGGTCACTTC
GAACTGCAGG ACGACGCGTT ACGCCTGCTG TGTTCGTACG GCTGGCCCGG CAACGTGCGC
GAGCTGCACA ACACGCTGGA GCGCGCGGTG ATGCTGTCGG ACAGCGAACG CATCGATGCG
CGCGCGCTTG CGCCGTTCAT CGGACCGGTG CGCGGGCAGG CCGCGTTCGT AGCGCCCGCG
CCTGTGCAGC ATGCGGCGGC CGGAGCTTCG ATGGAACGGG AGCCGCAGCA GTGGGCGGAC
GCGATGGCCG CGTTCGAGAA GCGCTTTCTG GACGATGCGC TGCGCGCGTG CGAGGGACGC
GTCACGGAAA CGGCCGCGCG CATCGGCATG GGTCGCGCGA CGCTCTACAA GAAGATCGCC
GCGTATGGCA TCGACGTGTG A
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| Protein sequence | MMNDWSGLPA TYSDVLRRAM DSLFRTFENF SEGTFIVDAD ARVVWINKRY AARFGFSDPQ
QAIGRDCEAV IPNSLMREVV MTGKPILLDV LETDREPLVV TRLPLKDDAG KTVGAVGFAL
FDEMKALTPL FSHYSRVQQE LIATRQSLAQ ARRAKYTFAS FVGTSAASLE VKRQARRASQ
VDSPVLLLGE TGTGKELLAH AIHGASSRST KPLVTVNVAA IPDALLEVEF FGAAAGAYTG
ADRKGRVGKF ELADGGTLFL DEIGDMPLPL QGKLLRVLQD REFEPLGSNR IVRADVRIIA
ATSADLPALV AEGRFRPDLF YRLNVLTIHA PPLRERQTDI EALAYTILED LSTQVRGGHF
ELQDDALRLL CSYGWPGNVR ELHNTLERAV MLSDSERIDA RALAPFIGPV RGQAAFVAPA
PVQHAAAGAS MEREPQQWAD AMAAFEKRFL DDALRACEGR VTETAARIGM GRATLYKKIA
AYGIDV
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