| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4271 |
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| Symbol | |
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| ID | 6245798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1271926 |
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| End bp | 1273038 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642596030 |
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| Product | porin |
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| Protein accession | YP_001860437 |
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| Protein GI | 186473095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGA ACAAGATCAA CAAGACAGCC GCGGCGGCCA TCGCAAGCGC CGCATTTCTC
TCGCTCGGCA CCAGCGCCCA CGCGCAAAGC AGCGTCACGA TGTATGGGGA GCTCGACACG
GGCCTCGCAT ATATCAGCAA CGTCGGCGGA CATTCGCAGT GGAAGTCGAC GACCGGCCTG
GTCGACGGCA GCTATTGGGG CTTGCAGGGT ATCGAGGATC TGGGCGGCGG GTATCGCGCG
ATCTTCCGGC TCGAGCGCGG CTTTTCGGTC ACGTCGGGTG AAATGCTCAA CGATCACCCG
TACTACGTGG GCATCGGCAA CGAGAAGGCA GGCACGCTGA CGCTGGGCCA TCAGTACGAT
CTCGTGCACG ACTACCTGGC ACCATTCACG CTGACGGGCG GCACGGGCGG CACCGCATTC
GCTCATCCGT TCGACAACGA CAACGCGAAC AACACCTACC TCGCCGCCAA CTCGGTCAAG
TATGCAAGCC CGTCGTTCGG CGGCCTGACG TTCGGCGGCA TGTACGCGTT CTCCAACACG
GCGGGTCAGT TTGCCAACAA CCGCGCGTAC AGCTTCGGCA TGAGCTATCA GGCGGGCGCG
CTGAACGCGG GCGCCGCGTA TCTGCATGCG AACGGGCGCG GCAATTCGTC GGCGGGTGCG
TATGAGGCCG TCGTGCTGCC CACCAGCACC AACGATGTCT TCGACGCTTC CGTGCAGACG
CAAAACACAT ACGGCGTCGG CGTGAGCTAT GCGATCGGCG ATTTCACGAT GGCGGCCGCG
TGGTCGCGTT CGACATTCAC GGGCGTCACC GTACTCGATA CGGGCGGCAT CGCGCCGTCC
GCGGGCTTTT CCAACTACGA AGTCAACGGT ATCTACCAGT TGACGCCGTC CGTCGCGCTG
GCCGGTTCGT ACACGTACAC GAAGGGTTCG GGCGCGCACT GGCACAACGG CGGCGTGCAG
GCCGACTACC AGTTTTCGAA GCGCACGGAT ACGTATCTGG AAGCTATTTA CCAGCGCGCG
TCGTCGGGCG CGCCGGCCGT CATCAATTCG GCCGATCCGT CGTCGGGCCA CAATCAGGTG
CTGATCGGCG CGGGCTTGCG GCACCGGTTC TGA
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| Protein sequence | MSANKINKTA AAAIASAAFL SLGTSAHAQS SVTMYGELDT GLAYISNVGG HSQWKSTTGL
VDGSYWGLQG IEDLGGGYRA IFRLERGFSV TSGEMLNDHP YYVGIGNEKA GTLTLGHQYD
LVHDYLAPFT LTGGTGGTAF AHPFDNDNAN NTYLAANSVK YASPSFGGLT FGGMYAFSNT
AGQFANNRAY SFGMSYQAGA LNAGAAYLHA NGRGNSSAGA YEAVVLPTST NDVFDASVQT
QNTYGVGVSY AIGDFTMAAA WSRSTFTGVT VLDTGGIAPS AGFSNYEVNG IYQLTPSVAL
AGSYTYTKGS GAHWHNGGVQ ADYQFSKRTD TYLEAIYQRA SSGAPAVINS ADPSSGHNQV
LIGAGLRHRF
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