| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4133 |
|---|
| Symbol | |
|---|
| ID | 6245661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1121006 |
|---|
| End bp | 1123618 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595893 |
|---|
| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
|---|
| Protein accession | YP_001860300 |
|---|
| Protein GI | 186472958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGT CCTCTATCGT TCGCCTCGTT GTCTGGTCGG TGCGCCGTCC ACTACAGGTC
ATCGGGCTGT CGCTCGTGCT CGCCGTGCTG AGCGCCATTT ACGTCGTTCA TCACTTCAAG
ATCAATACCG ACATCAGCCG TCTCGTCGAG AACGATGCGC AATGGGCAGC GCTCGGCGAC
CAGATCGACA AGGCCTTTCC CGATCGCGGA CAAACCTTGC TCGTGGTCGT GGAAGCGGGC
GCGCCCGAGT ACGCGGATGC CGCCGCGAAC ACGCTTGCCG CTGCACTTCA GAAAGAAACG
ACGGAATTCA GCTCGGTCAT GCAGCCCGGC AGCGGTCCGT TCTTTGAGAA GAACGGCTTG
CTGTTCCCGT CGTTGTCCGA GGTGCAATCG ACGACTTCGC AACTGGTCAA GGCGCGTCCG
CTGATCAACC AGCTTGCGCA CGATCCGAGC CTGACGGGCC TTGCGGGCAC GCTGACCACG
AGCCTGCTGC TGCCGCTGCA GATCGGCCAG GTGAAGCTCG GTGACATGAG CAATCTGTTG
ACGCGCAGCG CGACCGTCAT CGATCACGTG CTCGCCAATG AGCCTGCCGT TTTCTCGTGG
CGCGCGCTCG TCGACAAGGA CGCGGCAAAA ATGCCCGCGA GGGCGTTCAT CGTCGTGCAA
CCGAAGCTCG ACTACGCGGC GCTGCAAGCA GGTGCGAAAG CATCGGAGGT AATCCGCAAG
ACGGCCGCAT CGCTCGATCT CGATTCGCAA TACGGTGCAC GCATCCGCCT GACAGGCGAA
CAGCCGCTCG CCGATGAAGA GTTTGCGTCG GTGCAGGACG GTGCGGAGAT CAACGGTATC
GTCACGTTCT TCGTCGTGCT CGGCATCCTG TGGCTCGCGC TGCGCTCCGG GCGCCTGATC
GTCGCCGTGT TCGTCACGCT GTTCGTCGGG CTCGTTATCA CGGCTGCGCT CGGCCTGATG
ATGGTCGATG CGCTGAACAT GATTTCCGTC GCGTTCATGG TGCTGTTCGT GGGACTCGGC
GTCGACTTCG GCGTGCAGTT CGGCGTGAAG TACCGAGAGG AGCGCAATCG CGACGACCGT
CTCGCGGCCG CGCTGATCCA CACGGCCTAC AGCATCGGCG TGCCGTTGAC GCTCGCAGCC
GTCGCCGTCG CCGAGAGCTT CTTCTCATTC CTGCCGACGG CGTATCGCGG CGTCTCCGAA
CTCGGCGAGA TCGCAGGCGT CGGCATGTTC GTCGCGTACC TGACTAACAT GACGCTGCTG
CCCGCGCTCA TCAAGGTCTT CAATCCGCCC GGCGAAGCGG AGTCGCCGGG CTTTACGTTC
CTCGCGCCCG TCGACGACTT TCTCGATCGC AACCGCACTC CCGTGCTGAT CGCGACGGCC
GTGCTGATCA TCGGGGCATC GCCGCTGCTG CTGCATCTGC GTTTCGACTT CAATCCGCTG
CATCTGAAGG ATCCGAATAC GGAGTCCATG GCGACGCTGA TTTCGCTGAA CGATGCGCCC
GAAGCCGCCG TCAACAACGT GCGCGCGCTG GCGCCGACGC TGGCGGACGC GGACAGGATC
GCGGCGCGTC TTTCGAAGCT GCCGCAAGTG GGCCGCACGA CGACGCTCAG CACCTTCATT
CCCGCCGATC AGCCGCAAAA ACTCGCGTTG ATTTCAGCGG CGGCGCAGCA ACTGCTACCT
GCGCTCACGC AAACGCCCGC GCCGCCCTCC ACTGACGCCG TACGCGTCGC CGCGTTGAAA
CGCACGGCCA ACCAGCTCTC GCTCGCCGCC GACGACCATC CCGGCCCGGG CGCTGCGGAA
GCGAAGCATC TATCGGACAC GCTGAACAAG CTCGCGAGCG CAGACGTCTC AACGCGCGAT
CGCGCCGAAC GCGCGATGTC GGTGCCGCTG AAGCTTTCGC TGAAGCAGCT GGCCACTTTA
CTGCAACCGT CGGAAATCAC CCGCGAGAAC GTGCCGAAAG AGATCGCGGA CGGCTGGGTG
TCGAAGACAG GCCAGGCGCT CGTCGAGATT TCGCCGAAGG TGCCGCCCGG CACCGATCCC
GGCGACGACG TGATGCTGCG CAACTTCGCG AAGGCGGTGA AGTCCGCGGA ACCTGGCGCG
ATCGGCGGCC CGATCTCGAT CCTGCATTCG GCGAACGTGA TCATCAAGTC GTTCGTGCAG
GCGGGCGCAT GGGCCATCCT GTCGATCACC GCGTTGCTGT GGCTCACCCT GCGCCGTTTC
GGCGACGTGC TGCGCACGCT CGTGCCGCTG CTGGTGTCGG CCGTCGTCAC GCTGGAACTA
TGCGTGGTGT TCGGCATGCC ACTCAATTTC GCGAATATCA TTGCGCTGCC GCTGATGCTC
GGCGTCGGCG TCGCGTTCAA GATCTACTTC GTGATGGCGT GGCGCAGGGG GCAAACAGGC
CTGCTGCAAT CGAGCCTCAC GCACGCCGTG CTGTTCAGCG CGGCGACCAC GGCTACGGCG
TTCGGCAGCC TGTGGCTGTC GCACCATCCC GGCACCTCGA GCATGGGCCG CCTGCTGGCG
CTGTCCCTCT TGTGCACGTT AATTGGCGCT GTGGTATTCC AGCCCGTATT GATGGGTAAA
CCGCGCGCTC GCCGCGCATC GAAGAAACAA TAA
|
|---|
| Protein sequence | MLKSSIVRLV VWSVRRPLQV IGLSLVLAVL SAIYVVHHFK INTDISRLVE NDAQWAALGD
QIDKAFPDRG QTLLVVVEAG APEYADAAAN TLAAALQKET TEFSSVMQPG SGPFFEKNGL
LFPSLSEVQS TTSQLVKARP LINQLAHDPS LTGLAGTLTT SLLLPLQIGQ VKLGDMSNLL
TRSATVIDHV LANEPAVFSW RALVDKDAAK MPARAFIVVQ PKLDYAALQA GAKASEVIRK
TAASLDLDSQ YGARIRLTGE QPLADEEFAS VQDGAEINGI VTFFVVLGIL WLALRSGRLI
VAVFVTLFVG LVITAALGLM MVDALNMISV AFMVLFVGLG VDFGVQFGVK YREERNRDDR
LAAALIHTAY SIGVPLTLAA VAVAESFFSF LPTAYRGVSE LGEIAGVGMF VAYLTNMTLL
PALIKVFNPP GEAESPGFTF LAPVDDFLDR NRTPVLIATA VLIIGASPLL LHLRFDFNPL
HLKDPNTESM ATLISLNDAP EAAVNNVRAL APTLADADRI AARLSKLPQV GRTTTLSTFI
PADQPQKLAL ISAAAQQLLP ALTQTPAPPS TDAVRVAALK RTANQLSLAA DDHPGPGAAE
AKHLSDTLNK LASADVSTRD RAERAMSVPL KLSLKQLATL LQPSEITREN VPKEIADGWV
SKTGQALVEI SPKVPPGTDP GDDVMLRNFA KAVKSAEPGA IGGPISILHS ANVIIKSFVQ
AGAWAILSIT ALLWLTLRRF GDVLRTLVPL LVSAVVTLEL CVVFGMPLNF ANIIALPLML
GVGVAFKIYF VMAWRRGQTG LLQSSLTHAV LFSAATTATA FGSLWLSHHP GTSSMGRLLA
LSLLCTLIGA VVFQPVLMGK PRARRASKKQ
|
|---|
| |