Gene Bphy_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4088 
Symbol 
ID6245618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1084811 
End bp1085338 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID642595850 
Productputative membrane-associated protein 
Protein accessionYP_001860257 
Protein GI186472915 
COG category[S] Function unknown 
COG ID[COG5612] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.147925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC GCGCGTGCAA ATTTCTGTTG GTCGGCTCGC TGGTGCTCAA TGTGTTCCTG 
CTCGGCGGCG TTGCGGGCGG CGCGTATCAG TGGTTCGCCG GGCACGGCCG CCCGACGACT
GCGGCCGCGC AGCCGCGTGC GTTGCGTTTT GCCGCGGAAG AACTGTCGGC GGATCGTCAG
AAGCAGTTCT TCACGGCGCT CAAGGAGGCG CGCCGCGAAG CGCGAGAATA CGCGCGCGAG
GGCCGTGAGC AGCGGCGCGA GGTGCTGCGT CTGCTGGCTG CGCCGCAACT GGATCGCACG
GCGCTCGACA TGGCGCTGAA CCGCACGCGC GCAGCCGATA TCGCGTTGCG CTCGCGGATC
GAGCAGGGCG TGGCCGACTT CGCGGCAACC CTGTCGCCCG ATGAGCGCGT GAAGTTCGCC
GAGGGTCTGA GCGAGCGTGG GCAATGGCGG CTGCCGCAGA GTCCGGCGCA GGGGCAGAGC
CAGCCGCGGC AGCAACAGGA ACAGAACCAG CAGCCCGCTA CCGACTGA
 
Protein sequence
MSARACKFLL VGSLVLNVFL LGGVAGGAYQ WFAGHGRPTT AAAQPRALRF AAEELSADRQ 
KQFFTALKEA RREAREYARE GREQRREVLR LLAAPQLDRT ALDMALNRTR AADIALRSRI
EQGVADFAAT LSPDERVKFA EGLSERGQWR LPQSPAQGQS QPRQQQEQNQ QPATD