| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4004 |
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| Symbol | |
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| ID | 6245534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 977480 |
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| End bp | 979087 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595766 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001860173 |
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| Protein GI | 186472831 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGG TTCTGCGCAA TGCGCTAGCG GCAGTCGCCG TCGTTTCGGC ACTGACGCTT
ACGATGACGA CAACAAGCAC TGCGTTGGCG GCCACGCCGA AAGACATGCT GGTGATCGCC
ACCACGCTCG ACGAATTCTC GACGCTCGAT CCGGGCGAAG TGTACGAGTT GGTCCCCGAA
GAGTATGTTG CGAACACCTA CGACCGCCTC GTGCGCGTCG ATCTGAAAGA CCCCTCGAAA
TTCAACGGCG ACGTCGCGCA ATCATGGACG GTCAGCCCCG ACGGACTCAC GTTCACGTTC
AAGATCCGCT CCGGCCTCAA GTTCCATTCG GGCAACCCGC TCACGGCCGA AGACGTCGCA
TGGTCGATCC AGCGATGCGT GCTGCTCGAC AAGGGTGCAG CGGCAGTGTT GCAAGGCATC
GGACTGACGA AAGACAACGC ACTGCAGAAC GTGAAAAAGG TCGACGACTC GACCGTCAGC
ATCACGACAG ACCAGAAATA TGCGCCCACG TTCGTGCTGA ATGTGCTGGG CGCGTGGCCC
GCGTCGGTGG TTGACAAGAC GCTGCTGATG TCGCATCAGA AGGGCAATGA CTTCGGCAAC
GAATGGCTGC GCACGAACGA AGCGGGTTCG GGTGCCTACA AGCTCGTCAA ATGGAGCGCG
AACGAAAGCA TCATTCTGCA AAAGTTCGAT GGCTACCGGA TGCCACTTGC GATGAAGCGC
ATCGTGATGC GTCATGTGCC CGAGGCGGCA AGCCAGCGTC TGCTGCTCGA AAACGGCGAC
GCAGACGTCG CGCGCAATCT GAGCCCCGAC GATCTCGCCG CGCTCACGAA GGGCAACAAG
GTCACTGTCA ACTCGGTGCC GCAAGCGACG CTCCTCTATC TCGGCCTCAA TGTGAAGAAC
CCGAATCTCG CGAAGCCGGA AGTGCAGGAA GCGATGAAGT GGCTGATCGA CTACGACGGC
ATCCAGAAGA ACGTGACGAA GAACACCTTC AAGGTTCATC AGACCTTCCT GCCTGAAGGC
TTTCTCGGCG CGCTGAACAG CAATCCATAT CACCAGGATG TCGCGAAAGC GAAAGCACTG
CTCGCGAAGG CGGGCTTGCC GAACGGCTTC AACGTGACGA TGGACGTGCG CAGCGCGTAT
CCGTACAACG AAATCGCGCA GGCCGTGCAG GCCAATCTCG CGCAAGGCGG CATCAAGGTG
GAGATCATTC CCGGCGACAA CAAGCAGACG CTCGCGAAGT ATCGTGCGCG TCAGCATGAT
ATCTATATCG GCGAATGGTC GGCGGACTAC ATCGATCCGC ACAGCAATGC GCAAGGCTAC
GCGTGGAATC CTGACAACTC GGACAAGTCT TCGTACAAGA TGCTCGCGTG GCGCAATTCG
TGGGACATTC CCGATCTGAC GAAAGAGACC AACGCGGCAC TCGCCGAATC GTCGACGGCA
AAGCGTGCGC AACTCTATCA GACCATGCAG AAGGAAATGC TTGCTAAGTC GCCGTTCGTC
ATCATGTTCC AGCAGGTGTC GCAAGTGGCG ATGCGTCCGG GCGTATCGGG CCTCGAAGTC
GGCCCGATCA ACGACCTCGT GTCGTACCTG CACGTGAAGA AGCAGTAA
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| Protein sequence | MNLVLRNALA AVAVVSALTL TMTTTSTALA ATPKDMLVIA TTLDEFSTLD PGEVYELVPE
EYVANTYDRL VRVDLKDPSK FNGDVAQSWT VSPDGLTFTF KIRSGLKFHS GNPLTAEDVA
WSIQRCVLLD KGAAAVLQGI GLTKDNALQN VKKVDDSTVS ITTDQKYAPT FVLNVLGAWP
ASVVDKTLLM SHQKGNDFGN EWLRTNEAGS GAYKLVKWSA NESIILQKFD GYRMPLAMKR
IVMRHVPEAA SQRLLLENGD ADVARNLSPD DLAALTKGNK VTVNSVPQAT LLYLGLNVKN
PNLAKPEVQE AMKWLIDYDG IQKNVTKNTF KVHQTFLPEG FLGALNSNPY HQDVAKAKAL
LAKAGLPNGF NVTMDVRSAY PYNEIAQAVQ ANLAQGGIKV EIIPGDNKQT LAKYRARQHD
IYIGEWSADY IDPHSNAQGY AWNPDNSDKS SYKMLAWRNS WDIPDLTKET NAALAESSTA
KRAQLYQTMQ KEMLAKSPFV IMFQQVSQVA MRPGVSGLEV GPINDLVSYL HVKKQ
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