| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3995 |
|---|
| Symbol | |
|---|
| ID | 6245525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 969551 |
|---|
| End bp | 970444 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642595757 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001860164 |
|---|
| Protein GI | 186472822 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGT CGCGTTTTGA CCTCACCGAC CTGCGGCTAT TCCTGATGGT CGTCGAACAA
GGCAGCCTCA CGCGCGGCGC TCAGGCGATG CATCTCGCGC TCGCTTCGGC CAGCGAGCGC
ATCTCCGGCA TGGAGTCGGC GCTGGGCACG GCGCTGCTCG AACGCACGCG CCGCGGTGTG
CGCGCGACGC CCGCCGGCGA GGCGCTCGTG CGTCATGCGC GGCTGATCGT CGGGCAGGTC
GAACAGATGC GCGGCGAACT GCGCAGCTAC GCGAAGGGTC TGAAGGGCCG CGTGCATCTG
ATGTCGAACA CGGCTGCGCT TGCTTCGTTT CTGCCCGAGC AGATCGGCCG CTTCCTGATT
GCGCATCCCG ATCTGTCCGT CGATATCGAC GAGCGCCCGA GCGCGGACAT CGTGCGCGCC
GTTGCCGAAG GGCGCGCGGA TTTAGGCATC GTCGCGGATA TCGCCGACCT CGCTGCACTT
CAAACGCACA TGATCGCCGA CGACCAGCTG GTGGTGGCGG CGCGCCGCAC GCATCGCGTG
GCGAGCGAGG CGCGCGTCGC ATTCGCCGAT ATCGTCGACG AGCCGTTCGT GGGTCTATCG
GACGCGGCGC TCGAACGTCA CTTGACCGAA CGCGCATCGC GGCTTGGACG GCAGATGCAG
TATCGCGTGC GTTTGCGCCA TGTCGCCGAT CTCGGGCGTC TGATCGCTGC GGGCGTGGGC
ATTGCGATTC TGCCCGCTGC TTGCACGCAG CCGCTGTGCG ATGCGGATAT CGTCGTGTTG
CCGCTGTCGG AGGCGTGGAC GACGCGGCGT CTGCATCTGT GCGCGCGTGA CTTCGCAGCG
CTCACGCCAC ACGCGCATGC GCTCGCGCAA CAGCTGATGG CGCTCGGCGG GTGA
|
|---|
| Protein sequence | MTTSRFDLTD LRLFLMVVEQ GSLTRGAQAM HLALASASER ISGMESALGT ALLERTRRGV
RATPAGEALV RHARLIVGQV EQMRGELRSY AKGLKGRVHL MSNTAALASF LPEQIGRFLI
AHPDLSVDID ERPSADIVRA VAEGRADLGI VADIADLAAL QTHMIADDQL VVAARRTHRV
ASEARVAFAD IVDEPFVGLS DAALERHLTE RASRLGRQMQ YRVRLRHVAD LGRLIAAGVG
IAILPAACTQ PLCDADIVVL PLSEAWTTRR LHLCARDFAA LTPHAHALAQ QLMALGG
|
|---|
| |