Gene Bphy_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3975 
Symbol 
ID6245505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp949982 
End bp950797 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID642595737 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001860144 
Protein GI186472802 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCA TCAATCGACA TCCTGGCCGC ACCGGCAGTC TGATGCTGTT GCTGCTGCCC 
TTCATCGTGC TGATCGCGGT GTACTTCACC GGTTCGTCGC TGCGCCTGCA GGCGAATCCC
GACGACAAGC TGCTGCCGAG CGCCGCACAG ATGAAGGACG CGCTGCACGA ATACGCGTTC
ACCGAAGACA AGCGCACGGG CGAATACATG ATGTGGGACG ACACGGTGTC GAGCATGAGG
CGGCTCGGCA TCGGGCTCGT CGCAAGCGCG GCCGTTGCGC TCGTGTTCGG CATCGTCACG
GGCAGCATTC CGCTCGCGGG CGCGACACTG TCGCCGTTCA TCACCGTGAT ATCGATGATT
CCGCCGCTTG CCGTCCTGCC GATTCTCTTC ATCGTGTTCG GTCTCGATGA ATTGTCGAAG
GTCGTGCTGA TCGTGATCGG CATCACGCCG ATGATGATCC GCGACTTGCA GCAGCGCACG
CGCGAAATTC CAGAGGAACT GTGGATCAAG GCGCAAACGC TCGGTGCGTC GAGCTGGACG
CTGATCGTGC GCGTGATCGT GCCGCAACTG CTGCCGCGTC TGTTGATCGC GCTGCGTCTT
GCGTTGTGCT CCGCGTGGCT CTTTTTGATC GCTGCGGAAG CGATCGCTTC GACAGATGGC
CTCGGCTATC GCATCTTTCT CGTGCGTCGC TATCTCGCGA TGGATGTCAT CCTGCCGTAC
GTCGCATGGA TTACGCTGCT CGCGTGGCTG ATCGACGAAG CGCTGCGCCG TATCACGCAG
TGGGCGTTCC CCTGGTACAA CGGGGGCCGC GCATGA
 
Protein sequence
MRLINRHPGR TGSLMLLLLP FIVLIAVYFT GSSLRLQANP DDKLLPSAAQ MKDALHEYAF 
TEDKRTGEYM MWDDTVSSMR RLGIGLVASA AVALVFGIVT GSIPLAGATL SPFITVISMI
PPLAVLPILF IVFGLDELSK VVLIVIGITP MMIRDLQQRT REIPEELWIK AQTLGASSWT
LIVRVIVPQL LPRLLIALRL ALCSAWLFLI AAEAIASTDG LGYRIFLVRR YLAMDVILPY
VAWITLLAWL IDEALRRITQ WAFPWYNGGR A