| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3816 |
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| Symbol | |
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| ID | 6245354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 779993 |
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| End bp | 781222 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595586 |
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| Product | porin |
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| Protein accession | YP_001859993 |
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| Protein GI | 186472651 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.386084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.290962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCATC CGACGACGCC GCGGCAGATC GCGGCGGCGG TGGCCGCACT CGCCGCGGCG
CTGGCAGCGC CCTGCATCGC GCAAGCACAA AGCAGCATCA CGCTATACGG CGATGTCGAC
GCGGGCATCA CGTACACGAA CAACCAGCAG GTCACGCATG CGGACGGCAG CATTGGCGGC
GGTCACAACT TCCAGTTCAC GGGCGGCAAT TCCGCGCCCT CGCGCTTCGG CCTGACGGGC
AGCGAAGATC TCGGCGGCGG CACGGCCGTT ACGTTCAAGC TCGAAAACAG CTTCTATACG
GGCACGGGCA GCTTCGTGCA AGGCGGCACG CTGTTCAACC AGAACGCGTG GGTCGGCCTC
ACGAGCGAAC GTTACGGCAC GCTGACCTTC GGCCGCCAGT TCGATTCGTA CACGAATGCG
CTTGCACCGT ACGCGTCGAG TAACAACTGG GCTACGCTTT TCGGCTCCCA TCTCGGCGAC
GTCGACAACC TGAATGCCGC GCTGAATCTG AACAATGCGG TGCAGTACGT GAGTCCGACG
TTTGCAGGCT TTTCGGTGAG CGGCACGTAC TCGCTGGGCG GCGTCGCGGG TGACTTCGCG
CAAAAGCGCG GCTGGGCCGT CGCGGCGAGT TACAGCAACG CGCCGTTCTC GTTCGGCATC
GGCTATCTCG ACCTGAACAA TCCCCTCGAT GCGGCGCTCG GCGGCCAGCA GGGTTATATC
GGCGACTTTG CGTGCTCGAA TCCGACCGCG ATGTACTGCG AGCTGCAGAA CGCGCGCTCG
CTGAAGACGT TCGGCGCGGG CGGCACATAC ACGTTCGGAC CGGCGACGTT CGGCCTCGTC
TATACCCATA CGAAGCTGGA CGATAGCCAG TACTTCGCGA GCGCCGCCTT GCCGCAAGGC
TCCGATGTGC GCTTCGATAT TGTCGAAGTG AATGCGACGT ATGCGGTGTC GCCCGCTCTT
TCACTCGGCG CCGCGTATAT CTACAACTCG ATGAAAACCG ATGTGAGCGG TTCGCCGAAG
TTTCACCAGG CGAACCTGGG CGCGACCTAC AACCTGTCGA AGCGTACGAC GCTGTATGCC
GTGGGGATTT TCCAGAAGGC GGCGGGCAGC GGAATCGGCG CCGACCCTGT AACGGGGCAA
GCCGTGAATT ACGCACAGAT TCCCAATCTG CCGAATTCGA CGACCGACAA GCAGGTGTCG
GTAACTGTCG GGTTGAAGCA CAACTTCTGA
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| Protein sequence | MNHPTTPRQI AAAVAALAAA LAAPCIAQAQ SSITLYGDVD AGITYTNNQQ VTHADGSIGG
GHNFQFTGGN SAPSRFGLTG SEDLGGGTAV TFKLENSFYT GTGSFVQGGT LFNQNAWVGL
TSERYGTLTF GRQFDSYTNA LAPYASSNNW ATLFGSHLGD VDNLNAALNL NNAVQYVSPT
FAGFSVSGTY SLGGVAGDFA QKRGWAVAAS YSNAPFSFGI GYLDLNNPLD AALGGQQGYI
GDFACSNPTA MYCELQNARS LKTFGAGGTY TFGPATFGLV YTHTKLDDSQ YFASAALPQG
SDVRFDIVEV NATYAVSPAL SLGAAYIYNS MKTDVSGSPK FHQANLGATY NLSKRTTLYA
VGIFQKAAGS GIGADPVTGQ AVNYAQIPNL PNSTTDKQVS VTVGLKHNF
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