Gene Bphy_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3741 
Symbol 
ID6245283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp700896 
End bp702161 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content58% 
IMG OID642595511 
Producthypothetical protein 
Protein accessionYP_001859922 
Protein GI186472580 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.162842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAAA TGCCGCCGTC AAGCACGAAC GCAGCCGCCG AAGATCCGCC GGCATCCATG 
TGGCGTCGCA TGACGCCATG GGCAATGGGC GGCGCAGTCG TACTGCTGCT CATCGTTCTG
TTCGTTGCCT TCAACCCAAC GCGAAAGAGT CCGGATGAGC GCGCGCTGAG TGAGCTTGGA
TTCATTAAAG GCACCTGCAG CGACAGCGGC ACTTCAACAG CAAAAACCGA ATCGACCTGC
CTCGCACTGC GAGCGCAGCC GACCTTGACG GCGTCGCAAG TCGCTGCCGC CGTGCCGCAT
CTGAAGGATT CCGACCGCAA CATCGAATTG AATCTCGCCA ACACGCAAAT CGACAATCTC
GATGCACTGA AGGAACTGGA CACGCTGGAG TCGCTCGATC TGACGGGAAC GCCCATCTGG
AACATCGACG CACTCAAGGA CATGCATTCG CTGAAGCGGC TGGTTCTTCA TCGCACGGAG
GTCGAGAACA TCGCCGCGCT CAAAGGATTG ACCGGTCTGC AATCGCTTAC GCTGTGGGAC
ACGCGTGTTT CGAACCTCGA CGCGCTGAAG AGTCTCACTG ACCTGCGGCA ACTCGACCTG
CGTGACACAC AGGTTCGCGA TCTCGATCCG CTCGAAGATC TGCCTCGCCT GGACACGCTT
AAGCTCGGCG GCGCGCGAAA CGTGCGCGAC ATCGACGCGC TCGGCCAGCT CACTTCGCTG
AAAACACTCG ACCTTAACGA GACTCAGGTC GACAGCATCA AGCCGTTGAA GAAACTGCGC
GACATGCAGG CGCTCTATCT TGCGAATACA CCGCTGCGCG ACATCGATGC AATAAAGAAC
ATGCCCTCGC TCAAGACACT CGTGCTGGAC GGCTCGCGCG TGGACGATAT CGATGGCGTG
CGCGGACTGC AGCAAATGGA CACGCTCGTG CTCGCGCGCA CGCAAATCGC GAACATCGAC
GCGTTAAAGG GACTCACGGG CCTGCAAAGA CTGAATCTCG CCGACACACG CGTCGACAAT
ATCGATGCGC TAAGAGACCT GAAAAACCTT CGCATGCTGA ATCTTTTCCG CACGAGAGTG
CGAAATGTCG ATGCGCTGCG GGGCTTGACG AATCTGCAAG AGCTTTATCT CGCGAATACG
CCGATTGACG ACGTCGATGT ACTCAAGGGT TTATCGGGTT TGCGCGAACT CGTCCTCTAT
GGCACGAAGG CCAGGAACGT CGACGATCTC AAGGCGGCGC TGCCGAAAAC ACGGATCGTC
TGGTAA
 
Protein sequence
MSEMPPSSTN AAAEDPPASM WRRMTPWAMG GAVVLLLIVL FVAFNPTRKS PDERALSELG 
FIKGTCSDSG TSTAKTESTC LALRAQPTLT ASQVAAAVPH LKDSDRNIEL NLANTQIDNL
DALKELDTLE SLDLTGTPIW NIDALKDMHS LKRLVLHRTE VENIAALKGL TGLQSLTLWD
TRVSNLDALK SLTDLRQLDL RDTQVRDLDP LEDLPRLDTL KLGGARNVRD IDALGQLTSL
KTLDLNETQV DSIKPLKKLR DMQALYLANT PLRDIDAIKN MPSLKTLVLD GSRVDDIDGV
RGLQQMDTLV LARTQIANID ALKGLTGLQR LNLADTRVDN IDALRDLKNL RMLNLFRTRV
RNVDALRGLT NLQELYLANT PIDDVDVLKG LSGLRELVLY GTKARNVDDL KAALPKTRIV
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