Gene Bphy_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3627 
Symbol 
ID6245173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp578491 
End bp579207 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID642595400 
ProductABC transporter related 
Protein accessionYP_001859812 
Protein GI186472470 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTAT CGCCCACGCA CAAACCGTCA GCATTAGAAT GCCGCTCGTT GAGCAAAACC 
TACACAGCGA CTCGAACGGT ACTGGACCGC CTGGACGTCA AGCTCGCCGC GGGCGAATTC
GTAGCCATCA TGGGCGACTC AGGCGTCGGC AAGTCGACGC TATTGAACCT GATCGCGGGC
CTGGATCGCG CCGACTCGGG CGATGTGCTG ATCGACGGCA CGCCGATCTC CACACTCGAT
GACGATGCTG CAACGCGCCT GCGTCGCCAG AAACTAGGCT TCGTGTTTCA AGCCTTCCAT
GTGCTCCCCC ATCTGACGCT CGAACAAAAC GTCGCGCTGC CGCTGCTGCT GAACGGCCTC
GCGCCGCAGC GCGCCCACGA CATGCTCGCA GCCGTCGGTC TCGCAGGGCG CAATGACGAT
CTGCCTCGCC AGCTATCGGG CGGCGAACTG CAACGGGTCG CGATCGCGCG CGCGCTCGTG
CATCGCCCGA CGTTGATTCT CGCCGACGAG CCAACCGGCA ATCTCGACCC CGACACTGCA
CACGAGGTGC TCGCGCTGCT GCGCGAAGAA ACCAAGGCGA ACGGCGCGGC CACGATGATG
GTGACGCACT CGGAAGCCGC CGCCGCTTTC GCCGATCGCG TGCTCATACT CAGCGACGGC
AAGCTGCACG CCGCAGACGA TCCGCAAGCG CACGCGGCTC GCCCCTCGCA TGAATGA
 
Protein sequence
MHVSPTHKPS ALECRSLSKT YTATRTVLDR LDVKLAAGEF VAIMGDSGVG KSTLLNLIAG 
LDRADSGDVL IDGTPISTLD DDAATRLRRQ KLGFVFQAFH VLPHLTLEQN VALPLLLNGL
APQRAHDMLA AVGLAGRNDD LPRQLSGGEL QRVAIARALV HRPTLILADE PTGNLDPDTA
HEVLALLREE TKANGAATMM VTHSEAAAAF ADRVLILSDG KLHAADDPQA HAARPSHE