| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3520 |
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| Symbol | |
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| ID | 6245074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 456358 |
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| End bp | 458373 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642595301 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001859713 |
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| Protein GI | 186472371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGAAG GTGTCAATTT TTGCATTTTT TGCCGACATG CGACGCATGT CGAACTGTTG
CTGTATGAAG CGGCGGATAG CGCGGAGCCG TTCCAGGTCG TCGTGCTTAC GTCCGAGCAT
AATCGCTCGT TCTTCTATTG GCACGTACTG GTCGAGAACC TGCCTCCGCA CGTCTGCTAC
ACGTGGCGGG TGGACGGGCC GCATGACGCT CAAAACACCG GGCGTGTGTT CGACGCCCGC
CGCGAACTGC TCGATCCGTT CGCGCATGCG GTAAGCGACC TGCTCTGGGA CCGGCGCAAG
ACCATCGAAT CGGCGGACGT GGCGAACGCG GTTTACCGTG CGATCGTCGT CGAATCCACG
GCTGCGCCGC GCTTGCCGGT TGCGCGCGGC CTCGATGACT CGATCATTTA CGAACTTCAC
GTCGGCGGCT TTACACGCGA TCCTTCGAGC GGCGTTCGGC ATCCCGGCAC ATTCGACGGA
CTGATCGAAA AGATTCCGTA TTTTCAGCAA CTCGGCGTGA CGCACCTCGA GCTGCTGCCC
GTGATGGCGT TCGACGAACA GGATGTGCCC GACCCGGTCG CTGCACGCAG TCTAGTCAAC
TACTGGGGCT ACAGCACGCA TAGTTTTCAC AGCCCGCATC CGCGCTATTG CGTCGATCCG
GCAAACGCCG TGAACGAATT TCGTGCGATG ACGGACGCCA TGCACGCCGC GGGAATTCAG
GTGCTGCTCG ACGTGGTCTT CAATCACACG GCAGAAGCGG GCGAGGCGGG ACCCGTCATC
AACTTCAAGG GGTTCGCCAA CGACATCTTC TATCAGCACG ATCCGGGCGA CGCACGCCGC
TATCTCGACT ACACCGGCTG TGGGAACACA GTGAACTGCA ACCATCCGCT CGTGACGGCG
TTCATCGTGC ATTGCCTCGA ATACTGGGTC GAAGAAATGG GCGTCGACGG CTTCAGGTTC
GATCTTGCCA GCGTCTTCGC GCGCGACGGG CACGGCGAAC TGATGATCGA TCCGCCACTC
CCATGGGCGA TCGAATCGTC GCGCACCCTG TCGCGCGTGC CGCTGATCGC GGAAGCGTGG
GATGCGGCAG GCCTTTATCA CGTCGGGGCG TTTCCGGGCA TGGCGTGGGC AGAATGGAAT
GGACGTTACC GCGATGTGAT TCGCCGCTTC GTGCGCGGCG ACGCCGGGAT CATCGGGGAG
GTCGCGACCT GCATCGCCGG GAGCGCGGAT CTTTACGCGG ACGACGGCAG ATTGCCGGGC
AGTAGCGTGA ACTTCGTCAC CTGTCACGAC GGCTTTACTC TGAACGACCT CGTCAGCTAC
AACGGCAAGC ACAACGAGGC CAATGGCCAG GAAAACCGCG ACGGCTCGAA CGACAACCTG
TCATGGAACT GCGGTGCGGA AGGCGAAACG GATGACGCGG GAATCGTGCA ACTGCGTGGC
CGTCAGGCCC GCAATCTGAT GGCCATACTT TTTCTGAGCC AGGGCGTGCC GATGATGCTC
GCGGGTGATG AAGTACTCCA TAGCCAGCAC GGCAATAATA ATGGCTATTG CCAGGATAAC
GCGCTTTCGT GGTTCGACTG GCGTCGGGTC GAATCCGCAT CGGGAATGCT GCGGTTCATG
CGCGAACTGA TCGCGTTGCG CAAGCGTCAC GCAAGTCTGC GCCGACGGCG CTTTCTGACG
GGGCGACCCG TGCAGGGCCA CGCGCACCCG GACATCGCAT GGCACGGCGA ACGCCTCCAT
GAGCCCGAGT GGCAGAATCC GCGAGCGCGG CTTCTCGCAT TTACCGTGGG CGGTGAAGAT
CCGGGAGAGG CGCTCCTTCA TGTAGTTCTG AACATGGACG ATTTGGCACG TCAGGTCGCG
CTTCCCACTG TCCTCGGCGG AAAGTGCTGG TACCGGATCA TCGATACCGC ACAGGCCAGT
CCGCATGACA TTCTTTCGGC GCCACGCAAA GCAGCGACTG AGTTGGATCA CTGTTTGATA
CAGCCGCGTA CGGTCGTCGT ACTGGAGGCA GACTGA
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| Protein sequence | MPEGVNFCIF CRHATHVELL LYEAADSAEP FQVVVLTSEH NRSFFYWHVL VENLPPHVCY
TWRVDGPHDA QNTGRVFDAR RELLDPFAHA VSDLLWDRRK TIESADVANA VYRAIVVEST
AAPRLPVARG LDDSIIYELH VGGFTRDPSS GVRHPGTFDG LIEKIPYFQQ LGVTHLELLP
VMAFDEQDVP DPVAARSLVN YWGYSTHSFH SPHPRYCVDP ANAVNEFRAM TDAMHAAGIQ
VLLDVVFNHT AEAGEAGPVI NFKGFANDIF YQHDPGDARR YLDYTGCGNT VNCNHPLVTA
FIVHCLEYWV EEMGVDGFRF DLASVFARDG HGELMIDPPL PWAIESSRTL SRVPLIAEAW
DAAGLYHVGA FPGMAWAEWN GRYRDVIRRF VRGDAGIIGE VATCIAGSAD LYADDGRLPG
SSVNFVTCHD GFTLNDLVSY NGKHNEANGQ ENRDGSNDNL SWNCGAEGET DDAGIVQLRG
RQARNLMAIL FLSQGVPMML AGDEVLHSQH GNNNGYCQDN ALSWFDWRRV ESASGMLRFM
RELIALRKRH ASLRRRRFLT GRPVQGHAHP DIAWHGERLH EPEWQNPRAR LLAFTVGGED
PGEALLHVVL NMDDLARQVA LPTVLGGKCW YRIIDTAQAS PHDILSAPRK AATELDHCLI
QPRTVVVLEA D
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