| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3476 |
|---|
| Symbol | |
|---|
| ID | 6245036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 401125 |
|---|
| End bp | 402231 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642595263 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_001859675 |
|---|
| Protein GI | 186472333 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.978315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0818595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG ATCTGCCGAT GTCCTTCTAT CTCGACGACG CACAACGTTA CACACTCACC
CGACGCCGAA CGAGCTTCAG CTGGCGCACC GAATGGCCGA CATGGCTTCT GATCGGCGCG
ATCTACGGCG GATGGTTTTT TATCGCGAGC CATGCGCGCG TGCTCGGTCT GAACGCCGCG
ATTCCGCTGC TCGCCGTGTT CAGCGCGTGG TACATGTCGC TTCAGCACGA ACTGCTGCAC
GGGCACCCGA CGCGCTCCGC GTTCGTCAAC GCCCTGATCG GCTTTGCGCC GATCGCCGTG
TGGTTTCCGT ATCGCGTCTA TCGCCAGTTG CATTTGCAGC ATCACGACGA TCCGCATCTG
ACGCATCCCG AGATCGATCC CGAGAGCTTC TTCGTCAGCA GTCACGCGTG GCGGCAAGCG
GGACCGCTGA CGCGCGCGTT GCTTGTCGCG CGCAACACCT TCTTTGGACG TCTGCTGCTC
GGTCCGGCGT TTTCAATCGC GGCGACGGCG ACTCAGGCGC TGCGCAAGCC GCTGCGCGGC
GACTGGTCCG ATGTGCCCGC GTGGCTCGCG CATTTCGCGG CGCTCGCGGT ACTGATGGTG
TGGCTCGATC GCGCATGTGG GATTGCGCCG TGGCTGTTCA TCGCGGCTGT CGGGTACCCC
GCGCTGGCGT TGAGCGCCGT GCGCTCGTTT CACGAACATC GCGCTGCCCG TTCGCATGAA
CAGCGCTCCG TCATCAACGA GGCCGCGTGG TGCTGGCGTC TGCTGTTTCT GAACAACAAC
TATCATCTGG TCCATCATGA TCTGCCGCAG GTACCGTGGT TTGCGCTTCG GGAGGTCTAT
CATGAGTCCC GGCAGCAATA TCTCGAGCGC TCAGGAGGCT TTCTGGTAAA GGGCTACGGC
GAATGGTTGA AGCGTTATTC GTTCACTCGG ATCGCCCATC CACTTTATAG GGACATATCC
GATGTGATCT TAGATAAGCC ATCAGGTGCC GACAGTTTTG CGGGTAAATT GCGGGTAAAA
TCTATGGTAG TTGTCCTTCG GGGAGAATTC CATGAGGTTG ACCTACCCGC TGTTGCTGAA
CGCCAAACCG CAAGACAAGC CCTATAA
|
|---|
| Protein sequence | MTTDLPMSFY LDDAQRYTLT RRRTSFSWRT EWPTWLLIGA IYGGWFFIAS HARVLGLNAA
IPLLAVFSAW YMSLQHELLH GHPTRSAFVN ALIGFAPIAV WFPYRVYRQL HLQHHDDPHL
THPEIDPESF FVSSHAWRQA GPLTRALLVA RNTFFGRLLL GPAFSIAATA TQALRKPLRG
DWSDVPAWLA HFAALAVLMV WLDRACGIAP WLFIAAVGYP ALALSAVRSF HEHRAARSHE
QRSVINEAAW CWRLLFLNNN YHLVHHDLPQ VPWFALREVY HESRQQYLER SGGFLVKGYG
EWLKRYSFTR IAHPLYRDIS DVILDKPSGA DSFAGKLRVK SMVVVLRGEF HEVDLPAVAE
RQTARQAL
|
|---|
| |