Gene Bphy_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3466 
Symbol 
ID6245026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp390098 
End bp391063 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content60% 
IMG OID642595253 
ProductLysR family transcriptional regulator 
Protein accessionYP_001859665 
Protein GI186472323 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.935879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.213991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACGCTGCCAC TGTCGCCCTC GTCAACCGGC TCAAGTTCAA GCATCTTGCG 
CTGCTCGTCG CGCTCGACGA CGCCCGCAAC GTGCACCAGG CCGCCGACGC CATCAATGTT
GCACAGCCGA GCGCGAGCCG TATGCTCGGC GACATCGAGG AAGCGCTCGG CTTTCTGCTG
TTTGAGCGCA ATGCGCGCGG CATGCAGCCA ACACCGCTGG GCGTCGTCAC GCTGGCGTAT
GCACGGCGCG CGCTCGCGGA GCTGACGCGT TTTTCCGAGG ATCTGGATGT GAAGCGCAAG
GGCGGGCATG GGCAATTGAC TGTCGGTGCG ATCATGGGTG CGGCGCCCGA TCTGCTGGCG
ATGGCTGTCG CTGCGCTCAA GACTGAGCGG CCGCTGCTGC ATGTTTGCAT TCTCGGCGAG
ACCAGCGATC AGGTGGTGCA ATTGCTGCAT CGCCGCGAGG TTGATCTTGC GCTGGGGCGT
TTGACCAATC CGTTGCAGCA CAATGACTTC AGTTTTGAGC CTTTGGCCAG GGAGACGCTC
ACGCTCGTGG TTAGATCTGT GCATCCCCTG GCGAAGCGGG CTTCTATTTC GCTGCGCGAG
CTGATGGAAT GGCCTTGGGT TGCGCAGCCT ATTTCGAGCC CCGCTCGGGT GCTGTTCGAA
GAAGAACTTG CACGGGCTGG GCTCGGGACG CCGGCCAATC TCACTGAATG CGCTTCGATA
TTCGCAACCT TGCAGTTGCT CGAAAACTAT GACGCTGTCG CGATGTTGCC GGAGTCCGTC
GTGAGGGATC ACGTGCGTGG CAAGCTGCTT GTTGCGTTGC CGGTGGAGAT TGGCAAGAGC
CTTGCCGGGT TTGGCATTCT CACGCGGAAG GAAGAGGCTC TTGCTGAGCC TGCACAGCGG
TTTGTTGAAT TGCTACGGGT TTACTCGGCG AGGCTTTCTA AAGATGAGCC TCTAGCTGTG
CAATAG
 
Protein sequence
MSQNAATVAL VNRLKFKHLA LLVALDDARN VHQAADAINV AQPSASRMLG DIEEALGFLL 
FERNARGMQP TPLGVVTLAY ARRALAELTR FSEDLDVKRK GGHGQLTVGA IMGAAPDLLA
MAVAALKTER PLLHVCILGE TSDQVVQLLH RREVDLALGR LTNPLQHNDF SFEPLARETL
TLVVRSVHPL AKRASISLRE LMEWPWVAQP ISSPARVLFE EELARAGLGT PANLTECASI
FATLQLLENY DAVAMLPESV VRDHVRGKLL VALPVEIGKS LAGFGILTRK EEALAEPAQR
FVELLRVYSA RLSKDEPLAV Q