| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3461 |
|---|
| Symbol | |
|---|
| ID | 6245021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 384994 |
|---|
| End bp | 386022 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642595248 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001859660 |
|---|
| Protein GI | 186472318 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.488861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAC CAGATTCCGC GCTGCTCACG CGCAAACGCG AAACGCCGCT GCGTTGGGAG
ACCTTGCTGG TCGTCGTGCT GATCGCGTCG CTCGGCTTGG GGCGCGTGCT GTCGCCCGTG
TTCCTGACAG GCGCTAACCT CAGCAACGTG CTCGCCGATC TCGCGGAGAT CGCCTTGATG
GCACTGCCGA TGACGCTCAT CATCGTCGCA GCGGAGATCG ATCTGTCCGT GGCGTCGGTG
CTCGGCGCGT CGAGCGCGCT GATGGGCGTG CTGTGGCACA TGGGCCTGCC GATGCCCGTC
GTGATCGTGC TCGTGCTGGC GTCCGGCATG ATTGCGGGCC TGCTGAACGG GCTCGTGATC
GTGAAGCTGA ACCTGCCTTC GCTCGCAGTG ACGATCGGCA CACTCGCGCT GTTTCGCGGT
CTCTCGTATG TGCTGCTCGG CGATCAGGCC GTCGCCGATT TCCCGCCGAA CTACACGGCG
TTCGGCATGG ATACGCTGTT CGGCACGTTC GTTCCGTTGC CGTTCGCGAT CGTCATCGTG
TGCGCGGTGC TGTTCACGGT GCTGCTGCAG GCGACGGCGT TCGGCCGCTG CCTCTATGCG
ATCGGCGCGA ACTCGACGGC GGCCGCGTTC TCGGGCATCG AGGTCGCGAA GGTGCGCCTG
CTCCTGTTCG TGCTGTCCGG CTTCATGAGC GCGCTGGCGG GCATCGTCTA CACGTTGCGT
TTCACCAGCG CGCGCGGCGA CAACGGCGAG GGCTTCGAGC TGTCGGTGAT CGCGGCCGTG
CTGTTCGGCG GTGTGAGTAT CTTCGGCGGG CGCGGGTCGA TGGTTGGCGT GCTGCTGTCG
CTGCTGATCA TCGGCGTATT GAAAAATGCG TTGACGCTCG ACGACGTATC GAGCGAAACG
CTGACCATCG TCACGGGCGC GCTGCTGCTC GCCTCGGTGC TGATTCCGAA TCTGGTCGCG
CGCTGGCGCG CGATGCGGGA CCGCAAGCTG ATTGCCGCTC AAGCATTGAC GAAACCGACC
GCGCCCTAG
|
|---|
| Protein sequence | MAKPDSALLT RKRETPLRWE TLLVVVLIAS LGLGRVLSPV FLTGANLSNV LADLAEIALM
ALPMTLIIVA AEIDLSVASV LGASSALMGV LWHMGLPMPV VIVLVLASGM IAGLLNGLVI
VKLNLPSLAV TIGTLALFRG LSYVLLGDQA VADFPPNYTA FGMDTLFGTF VPLPFAIVIV
CAVLFTVLLQ ATAFGRCLYA IGANSTAAAF SGIEVAKVRL LLFVLSGFMS ALAGIVYTLR
FTSARGDNGE GFELSVIAAV LFGGVSIFGG RGSMVGVLLS LLIIGVLKNA LTLDDVSSET
LTIVTGALLL ASVLIPNLVA RWRAMRDRKL IAAQALTKPT AP
|
|---|
| |