| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3431 |
|---|
| Symbol | |
|---|
| ID | 6244992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 356111 |
|---|
| End bp | 357076 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642595219 |
|---|
| Product | ornithine cyclodeaminase/mu-crystallin |
|---|
| Protein accession | YP_001859631 |
|---|
| Protein GI | 186472289 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.606988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.893267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG CCTTGCCACT CGCCGTCGAC GAACAGGCCG TCCGCGAAAC GCTGCCCGCC
CTCGACGTGC GCCGCGCACT GACAGCGATG TTTCGCGCGT TGGCGTCCTC CGAGGCCGTG
CAGCCGCCGC AGACGCTGAC GCTGTTGCCG AACGGCGCCG GCGATTTCAT CACCTATCTT
GGCGCGCTTG CCGATGCGAA GGTGTTCGGC GCGAAGCTGT CGCCGTACAT CGTGACGGGC
GGCCGTCCGA TCATCACCGC GTGGACGGCG CTGATGTCGA TGGAAACGGG GCAACCGCTG
ATGTGGTGCG ACGCTGGCCT GCTCACCACC GAACGCACGG CGGGCACCAC GGCGCTTGCT
GTCGATCAGC TCGCGCGCGC CGATGCGGCG CGGCTGGCCG TGGTTGGCGC GGGCGCTGTC
GGACTGGCGC ATTTGCGGCA CGTCGCGCCG CTGCGTGCAT GGGAGTCGAT CCGCGTGTAT
TCGCCCGATC TCGCCTCCAA CCATGAGAAG CGCGCGGCCG TACAGGCCGC CGAACCGCGC
GCCGAGGCCA GCGCAAGTCT CGCTGCGTGT GTGAAGGACG CGGACGTCGT GATGTTGTGC
ACGTCGTCGG GCACGCCCGT GCTGCCGCGC GACGCGTTGA CGAAGCCCGC GCTCGTTACG
TCGATCAGCA CGAATGCCGC CAACGCGCAC GAAATCGATC CGGCGTGGCT GCCGGAAATG
GACGTGTACT GCGACTATCG AGCGACGACG CCAGCGAGCG CCGGTGAAAT GAAGCTCGCC
GCGCAGCAAG GCTGGTCGCC GGAAGATGTG CAGGGCGATC TCCCGTCGCT GCTGGCGGGC
ACGTGCGCAA AGCCCGCGTA CGGGCGGCAC GCGTTCTTCC GTTCGATCGG TCTCGGTCTC
GAAGACGTCG CGATTGCGAG CGAGCTGTAT CGCCACCTGA GCAATCGTAG AGACGAGGCG
CAATAG
|
|---|
| Protein sequence | MKTALPLAVD EQAVRETLPA LDVRRALTAM FRALASSEAV QPPQTLTLLP NGAGDFITYL
GALADAKVFG AKLSPYIVTG GRPIITAWTA LMSMETGQPL MWCDAGLLTT ERTAGTTALA
VDQLARADAA RLAVVGAGAV GLAHLRHVAP LRAWESIRVY SPDLASNHEK RAAVQAAEPR
AEASASLAAC VKDADVVMLC TSSGTPVLPR DALTKPALVT SISTNAANAH EIDPAWLPEM
DVYCDYRATT PASAGEMKLA AQQGWSPEDV QGDLPSLLAG TCAKPAYGRH AFFRSIGLGL
EDVAIASELY RHLSNRRDEA Q
|
|---|
| |